The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q0D2J5-2
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
AK299182 - Homo sapiens cDNA FLJ58611 complete cds, highly similar to Homo sapiens zinc finger protein 440 like (ZNF440L), mRNA. AK299224 - Homo sapiens cDNA FLJ58613 complete cds, highly similar to Homo sapiens zinc finger protein 440 like (ZNF440L), mRNA. AK092240 - Homo sapiens cDNA FLJ34921 fis, clone NT2RP7002978, moderately similar to Zinc finger protein 440. AX747424 - Sequence 949 from Patent EP1308459. BC105711 - Homo sapiens zinc finger protein 763, mRNA (cDNA clone MGC:125563 IMAGE:40024621), complete cds. BC105712 - Homo sapiens zinc finger protein 763, mRNA (cDNA clone MGC:125561 IMAGE:40024618), complete cds. BC105713 - Homo sapiens zinc finger protein 763, mRNA (cDNA clone MGC:125560 IMAGE:40024617), complete cds. AB528905 - Synthetic construct DNA, clone: pF1KE0674, Homo sapiens ZNF763 gene for zinc finger protein 763, without stop codon, in Flexi system. JD326367 - Sequence 307391 from Patent EP1572962. JD365462 - Sequence 346486 from Patent EP1572962. DQ572200 - Homo sapiens piRNA piR-40312, complete sequence. JD503887 - Sequence 484911 from Patent EP1572962. JD486559 - Sequence 467583 from Patent EP1572962. JD202963 - Sequence 183987 from Patent EP1572962. JD246010 - Sequence 227034 from Patent EP1572962. JD369433 - Sequence 350457 from Patent EP1572962. JD363493 - Sequence 344517 from Patent EP1572962. JD173964 - Sequence 154988 from Patent EP1572962. JD379462 - Sequence 360486 from Patent EP1572962. JD533732 - Sequence 514756 from Patent EP1572962. JD043386 - Sequence 24410 from Patent EP1572962. JD541607 - Sequence 522631 from Patent EP1572962. JD155105 - Sequence 136129 from Patent EP1572962. JD182446 - Sequence 163470 from Patent EP1572962. JD548159 - Sequence 529183 from Patent EP1572962. JD143526 - Sequence 124550 from Patent EP1572962. JD144586 - Sequence 125610 from Patent EP1572962. JD400290 - Sequence 381314 from Patent EP1572962. JD424462 - Sequence 405486 from Patent EP1572962. JD238572 - Sequence 219596 from Patent EP1572962. JD508961 - Sequence 489985 from Patent EP1572962. JD294258 - Sequence 275282 from Patent EP1572962. JD277317 - Sequence 258341 from Patent EP1572962. JD472672 - Sequence 453696 from Patent EP1572962. JD282073 - Sequence 263097 from Patent EP1572962. JD270214 - Sequence 251238 from Patent EP1572962.