Human Gene TMEM222 (uc001bns.4)
|
|
Sequence and Links to Tools and Databases
|
|
Primer design for this transcript
|
|
Comparative Toxicogenomics Database (CTD)
|
|
The following chemicals interact with this gene
| |
|
|
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
|
|
Microarray Expression Data
|
|
Press "+" in the title bar above to open this section.
| |
|
|
Orthologous Genes in Other Species
|
|
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
|
| |
|
|
Descriptions from all associated GenBank mRNAs
|
|
AK313110 - Homo sapiens cDNA, FLJ93595. AK303821 - Homo sapiens cDNA FLJ56305 complete cds. AL136683 - Homo sapiens mRNA; cDNA DKFZp564D0478 (from clone DKFZp564D0478). BC011579 - Homo sapiens transmembrane protein 222, mRNA (cDNA clone IMAGE:4548544), partial cds. BC090039 - Homo sapiens transmembrane protein 222, mRNA (cDNA clone MGC:111002 IMAGE:6181849), complete cds. EU831513 - Synthetic construct Homo sapiens clone HAIB:100066542; DKFZo004B0718 chromosome 1 open reading frame 160 protein (C1orf160) gene, encodes complete protein. KJ904908 - Synthetic construct Homo sapiens clone ccsbBroadEn_14302 TMEM222 gene, encodes complete protein. EU831420 - Synthetic construct Homo sapiens clone HAIB:100066449; DKFZo008B0717 chromosome 1 open reading frame 160 protein (C1orf160) gene, encodes complete protein. AF251699 - Homo sapiens hypothetical protein SB71 mRNA, complete cds. AK222642 - Homo sapiens mRNA for hypothetical protein DKFZp564D0478 variant, clone: CBL02969. AK307077 - Homo sapiens cDNA, FLJ97025. JD271282 - Sequence 252306 from Patent EP1572962. AK123218 - Homo sapiens cDNA FLJ41224 fis, clone BRAMY2030098. AK095889 - Homo sapiens cDNA FLJ38570 fis, clone HCHON2006722. JD396340 - Sequence 377364 from Patent EP1572962. JD210155 - Sequence 191179 from Patent EP1572962. JD114748 - Sequence 95772 from Patent EP1572962. JD102628 - Sequence 83652 from Patent EP1572962. JD424797 - Sequence 405821 from Patent EP1572962. JD338840 - Sequence 319864 from Patent EP1572962. JD189300 - Sequence 170324 from Patent EP1572962. JD173179 - Sequence 154203 from Patent EP1572962. JD066153 - Sequence 47177 from Patent EP1572962. JD432795 - Sequence 413819 from Patent EP1572962. JD198676 - Sequence 179700 from Patent EP1572962. JD109771 - Sequence 90795 from Patent EP1572962. JD507122 - Sequence 488146 from Patent EP1572962. JD104444 - Sequence 85468 from Patent EP1572962. JD478836 - Sequence 459860 from Patent EP1572962. JD222808 - Sequence 203832 from Patent EP1572962. JD451044 - Sequence 432068 from Patent EP1572962. JD371499 - Sequence 352523 from Patent EP1572962.
| |
|
|
Other Names for This Gene
|
|
Alternate Gene Symbols: NR_037577 UCSC ID: uc001bns.4 RefSeq Accession: NR_037577
| |
|
|
Gene Model Information
|
|
category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| NR_037577.1
|
exon count:
| 7 | CDS single in 3' UTR:
| no
| RNA size:
| 1717 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 658.00 | frame shift in genome:
| no
| % Coverage:
| 99.13 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
|
Click here
for a detailed description of the fields of the table above.
| |
|
|
Methods, Credits, and Use Restrictions
|
|
Click here
for details on how this gene model was made and data restrictions if any.
| |
|
|
|