Human Gene NSUN4 (uc001cpt.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Genetic Association Studies of Complex Diseases and Disorders
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Genetic Association Database (archive): NSUN4
CDC HuGE Published Literature: NSUN4
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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AK021577 - Homo sapiens cDNA FLJ11515 fis, clone HEMBA1002241, weakly similar to PROLIFERATING-CELL NUCLEOLAR ANTIGEN P120. BC014441 - Homo sapiens NOL1/NOP2/Sun domain family, member 4, mRNA (cDNA clone MGC:22960 IMAGE:4865283), complete cds. BX648592 - Homo sapiens mRNA; cDNA DKFZp686F22205 (from clone DKFZp686F22205). AK291741 - Homo sapiens cDNA FLJ77328 complete cds, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 4 (NSUN4), mRNA. AK311009 - Homo sapiens cDNA, FLJ18051. AK295003 - Homo sapiens cDNA FLJ60253 complete cds, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 4 (NSUN4), mRNA. CU676995 - Synthetic construct Homo sapiens gateway clone IMAGE:100017631 5' read NSUN4 mRNA. AB528648 - Synthetic construct DNA, clone: pF1KB6510, Homo sapiens NSUN4 gene for NOL1/NOP2/Sun domain family, member 4, without stop codon, in Flexi system. KJ900689 - Synthetic construct Homo sapiens clone ccsbBroadEn_10083 NSUN4 gene, encodes complete protein. AK057420 - Homo sapiens cDNA FLJ32858 fis, clone TESTI2003551, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 4 (NSUN4), mRNA. AK292353 - Homo sapiens cDNA FLJ77850 complete cds. AK128066 - Homo sapiens cDNA FLJ46186 fis, clone TESTI4005013. AK097524 - Homo sapiens cDNA FLJ40205 fis, clone TESTI2020840, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 4 (NSUN4), mRNA. JD019203 - Sequence 227 from Patent EP1572962. JD028565 - Sequence 9589 from Patent EP1572962. DQ573389 - Homo sapiens piRNA piR-41501, complete sequence. JD035941 - Sequence 16965 from Patent EP1572962. BC016907 - Homo sapiens NOL1/NOP2/Sun domain family, member 4, mRNA (cDNA clone IMAGE:4396276), partial cds. AL713746 - Homo sapiens mRNA; cDNA DKFZp761L0723 (from clone DKFZp761L0723). JD471839 - Sequence 452863 from Patent EP1572962. JD381178 - Sequence 362202 from Patent EP1572962. JD537255 - Sequence 518279 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: AK128066, uc001cpt.1 UCSC ID: uc001cpt.2 RefSeq Accession: NM_001256127
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| AK128066.1
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exon count:
| 6 | CDS single in 3' UTR:
| no
| RNA size:
| 3867 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.95 |
txCdsPredict score:
| 3185.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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