Human Gene EXOSC8 (uc001uvz.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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MalaCards Disease Associations
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Comparative Toxicogenomics Database (CTD)
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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KJ898406 - Synthetic construct Homo sapiens clone ccsbBroadEn_07800 EXOSC8 gene, encodes complete protein. AK096810 - Homo sapiens cDNA FLJ39491 fis, clone PROST2015924, weakly similar to Homo sapiens Opa-interacting protein OIP2 mRNA. BC020773 - Homo sapiens exosome component 8, mRNA (cDNA clone MGC:22685 IMAGE:4808747), complete cds. AL050353 - Homo sapiens mRNA; cDNA DKFZp564C0482 (from clone DKFZp564C0482). AF279901 - Homo sapiens PNAS-147 mRNA, partial sequence. AB463623 - Synthetic construct DNA, clone: pF1KB6391, Homo sapiens EXOSC8 gene for exosome component 8, without stop codon, in Flexi system. DQ896414 - Synthetic construct Homo sapiens clone IMAGE:100010874; FLH194102.01L; RZPDo839F0669D exosome component 8 (EXOSC8) gene, encodes complete protein. DQ893134 - Synthetic construct clone IMAGE:100005764; FLH194106.01X; RZPDo839F0679D exosome component 8 (EXOSC8) gene, encodes complete protein. AF025438 - Homo sapiens Opa-interacting protein OIP2 mRNA, partial cds. AK126602 - Homo sapiens cDNA FLJ44639 fis, clone BRACE2027382, highly similar to Homo sapiens Opa-interacting protein OIP2.
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Biochemical and Signaling Pathways
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KEGG - Kyoto Encyclopedia of Genes and Genomes hsa03018 - RNA degradation
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Other Names for This Gene
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Alternate Gene Symbols: AF279901 UCSC ID: uc001uvz.2 RefSeq Accession: NM_181503
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| no
| RNA accession:
| AF279901.1
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exon count:
| 11 | CDS single in 3' UTR:
| no
| RNA size:
| 798 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.49 |
txCdsPredict score:
| 81.00 | frame shift in genome:
| no
| % Coverage:
| 95.61 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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