Human Gene SMIM2 (uc001uzh.1)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC000868 - Homo sapiens hypothetical protein MGC5590, mRNA (cDNA clone MGC:5590 IMAGE:3460233), complete cds. JD300503 - Sequence 281527 from Patent EP1572962. JD307505 - Sequence 288529 from Patent EP1572962. JD163958 - Sequence 144982 from Patent EP1572962. JD546866 - Sequence 527890 from Patent EP1572962. JD181806 - Sequence 162830 from Patent EP1572962. JD556896 - Sequence 537920 from Patent EP1572962. JD432721 - Sequence 413745 from Patent EP1572962. JD338913 - Sequence 319937 from Patent EP1572962. JD074392 - Sequence 55416 from Patent EP1572962. JD524839 - Sequence 505863 from Patent EP1572962. JD062633 - Sequence 43657 from Patent EP1572962. KJ903136 - Synthetic construct Homo sapiens clone ccsbBroadEn_12530 C13orf44 gene, encodes complete protein. JD072811 - Sequence 53835 from Patent EP1572962. JD444716 - Sequence 425740 from Patent EP1572962. JD318940 - Sequence 299964 from Patent EP1572962. JD159548 - Sequence 140572 from Patent EP1572962. JD164264 - Sequence 145288 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: BC000868, MGC5590 UCSC ID: uc001uzh.1 Representative RNA: BC000868
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Gene Model Information
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category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| BC000868.1
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exon count:
| 3 | CDS single in 3' UTR:
| no
| RNA size:
| 1240 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 590.50 | frame shift in genome:
| no
| % Coverage:
| 97.90 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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