Human Gene DLEU1 (uc001vel.1)
  Description: Homo sapiens mRNA for B-cell neoplasia associated transcript, (DLEU1 gene), splice variant D, non coding transcript.
Transcript (Including UTRs)
   Position: hg19 chr13:50,760,016-51,066,897 Size: 306,882 Total Exon Count: 4 Strand: +


Page IndexSequence and LinksPrimersGenetic AssociationsCTDRNA-Seq Expression
Microarray ExpressionOther SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr13:50,760,016-51,066,897)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaEnsembl
ExonPrimerHGNCPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): DLEU1
CDC HuGE Published Literature: DLEU1

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.04 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 16.42 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AJ412038 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant P, non coding transcript.
AJ412039 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant Q, non coding transcript.
AJ412054 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AF, non coding transcript.
AJ412026 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant D, non coding transcript.
AJ412055 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AG, non coding transcript.
AJ412056 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AH, non coding transcript.
AJ412057 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AI, non coding transcript.
AJ412058 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AJ, non coding transcript.
AJ412059 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AK, non coding transcript.
AJ412060 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AL, non coding transcript.
AJ412061 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AM, non coding transcript.
AJ412062 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AN, non coding transcript.
AJ412040 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant R, non coding transcript.
AJ412041 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant S, non coding transcript.
AJ412042 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant T, non coding transcript.
AJ412043 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant U, non coding transcript.
AJ412044 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant V, non coding transcript.
AJ412045 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant W, non coding transcript.
AJ412046 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant X, non coding transcript.
AJ412049 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AA, non coding transcript.
AJ412063 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AO, non coding transcript.
AJ412028 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant F, non coding transcript.
AJ412027 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant E, non coding transcript.
AJ412029 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant G, non coding transcript.
AJ412031 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant I, non coding transcript.
JD424313 - Sequence 405337 from Patent EP1572962.
JD424314 - Sequence 405338 from Patent EP1572962.
AJ412047 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant Y, non coding transcript.
AJ412048 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant Z, non coding transcript.
AJ412050 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AB, non coding transcript.
AJ412051 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant AC, non coding transcript.
AJ412033 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant K, non coding transcript.
AJ412034 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant L, non coding transcript.
AJ412036 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant N, non coding transcript.
AJ412037 - Homo sapiens mRNA for B-cell neoplasia associated transcript, (BCMS gene), splice variant O, non coding transcript.

-  Other Names for This Gene
  Alternate Gene Symbols: AJ412042, BCMS
UCSC ID: uc001vel.1
Representative RNA: AJ412042

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: AJ412042.1
exon count: 4CDS single in 3' UTR: no RNA size: 534
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 131.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.