Human Gene ATP11A-AS1 (uc001vsk.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC041346 - Homo sapiens cDNA clone IMAGE:5272198. JD541083 - Sequence 522107 from Patent EP1572962. JD458821 - Sequence 439845 from Patent EP1572962. JD239834 - Sequence 220858 from Patent EP1572962. JD056309 - Sequence 37333 from Patent EP1572962. JD458821 - Sequence 439845 from Patent EP1572962. JD239833 - Sequence 220857 from Patent EP1572962. JD311589 - Sequence 292613 from Patent EP1572962. JD423403 - Sequence 404427 from Patent EP1572962. JD331549 - Sequence 312573 from Patent EP1572962. JD531379 - Sequence 512403 from Patent EP1572962. JD360019 - Sequence 341043 from Patent EP1572962. JD366609 - Sequence 347633 from Patent EP1572962. JD230050 - Sequence 211074 from Patent EP1572962. JD490043 - Sequence 471067 from Patent EP1572962. JD279729 - Sequence 260753 from Patent EP1572962. JD437141 - Sequence 418165 from Patent EP1572962. JD335353 - Sequence 316377 from Patent EP1572962. JD442945 - Sequence 423969 from Patent EP1572962. JD532250 - Sequence 513274 from Patent EP1572962. JD558759 - Sequence 539783 from Patent EP1572962. JD201433 - Sequence 182457 from Patent EP1572962. JD523794 - Sequence 504818 from Patent EP1572962. JD085883 - Sequence 66907 from Patent EP1572962. JD447873 - Sequence 428897 from Patent EP1572962. JD319351 - Sequence 300375 from Patent EP1572962. JD287062 - Sequence 268086 from Patent EP1572962. JD291901 - Sequence 272925 from Patent EP1572962. JD206755 - Sequence 187779 from Patent EP1572962. JD095502 - Sequence 76526 from Patent EP1572962. JD446287 - Sequence 427311 from Patent EP1572962. JD368406 - Sequence 349430 from Patent EP1572962. JD067943 - Sequence 48967 from Patent EP1572962. JD491214 - Sequence 472238 from Patent EP1572962. JD513051 - Sequence 494075 from Patent EP1572962. JD412958 - Sequence 393982 from Patent EP1572962. JD187524 - Sequence 168548 from Patent EP1572962. JD412957 - Sequence 393981 from Patent EP1572962. JD098201 - Sequence 79225 from Patent EP1572962. JD048694 - Sequence 29718 from Patent EP1572962. JD094473 - Sequence 75497 from Patent EP1572962. JD411459 - Sequence 392483 from Patent EP1572962. JD562393 - Sequence 543417 from Patent EP1572962. JD447471 - Sequence 428495 from Patent EP1572962. JD533386 - Sequence 514410 from Patent EP1572962. JD137557 - Sequence 118581 from Patent EP1572962. JD338619 - Sequence 319643 from Patent EP1572962. JD474894 - Sequence 455918 from Patent EP1572962. JD338094 - Sequence 319118 from Patent EP1572962. JD380780 - Sequence 361804 from Patent EP1572962. JD203546 - Sequence 184570 from Patent EP1572962. AK093292 - Homo sapiens cDNA FLJ35973 fis, clone TESTI2013268. AX748036 - Sequence 1561 from Patent EP1308459. JD404825 - Sequence 385849 from Patent EP1572962. JD317925 - Sequence 298949 from Patent EP1572962. JD196515 - Sequence 177539 from Patent EP1572962. JD511278 - Sequence 492302 from Patent EP1572962. JD072894 - Sequence 53918 from Patent EP1572962. JD317795 - Sequence 298819 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: BC041346 UCSC ID: uc001vsk.3 Representative RNA: BC041346
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Gene Model Information
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category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| BC041346.1
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exon count:
| 2 | CDS single in 3' UTR:
| no
| RNA size:
| 2216 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.95 |
txCdsPredict score:
| 230.00 | frame shift in genome:
| no
| % Coverage:
| 98.69 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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