Human Gene RP11-323F24.5 (uc002adz.1)
  Description: Homo sapiens uncharacterized RP11-323F24.5 (RP11-323F24.5), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr15:57,178,368-57,210,697 Size: 32,330 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr15:57,178,368-57,210,697)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerGeneNetworkH-INVLynxPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 6.38 RPKM in Cervix - Endocervix
Total median expression: 158.92 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC036541 - Homo sapiens cDNA clone IMAGE:4829311.
AK056606 - Homo sapiens cDNA FLJ32044 fis, clone NTONG2000985.
AK096657 - Homo sapiens cDNA FLJ39338 fis, clone OCBBF2017899.
JD496703 - Sequence 477727 from Patent EP1572962.
JD097811 - Sequence 78835 from Patent EP1572962.
JD307825 - Sequence 288849 from Patent EP1572962.
JD313602 - Sequence 294626 from Patent EP1572962.
JD171284 - Sequence 152308 from Patent EP1572962.
JD241848 - Sequence 222872 from Patent EP1572962.
JD173892 - Sequence 154916 from Patent EP1572962.
JD225503 - Sequence 206527 from Patent EP1572962.
JD540723 - Sequence 521747 from Patent EP1572962.
JD114285 - Sequence 95309 from Patent EP1572962.
JD098663 - Sequence 79687 from Patent EP1572962.
JD188769 - Sequence 169793 from Patent EP1572962.
JD337632 - Sequence 318656 from Patent EP1572962.
JD310708 - Sequence 291732 from Patent EP1572962.
JD361556 - Sequence 342580 from Patent EP1572962.
JD524341 - Sequence 505365 from Patent EP1572962.
JD363450 - Sequence 344474 from Patent EP1572962.
BC063546 - Homo sapiens cDNA clone IMAGE:4755015, partial cds.
JD279063 - Sequence 260087 from Patent EP1572962.
JD425213 - Sequence 406237 from Patent EP1572962.
JD071512 - Sequence 52536 from Patent EP1572962.
JD338945 - Sequence 319969 from Patent EP1572962.
JD062124 - Sequence 43148 from Patent EP1572962.
JD565120 - Sequence 546144 from Patent EP1572962.
JD358517 - Sequence 339541 from Patent EP1572962.
JD414105 - Sequence 395129 from Patent EP1572962.
JD438120 - Sequence 419144 from Patent EP1572962.
JD313457 - Sequence 294481 from Patent EP1572962.
JD345819 - Sequence 326843 from Patent EP1572962.
JD179797 - Sequence 160821 from Patent EP1572962.
JD129840 - Sequence 110864 from Patent EP1572962.
JD223184 - Sequence 204208 from Patent EP1572962.
JD476369 - Sequence 457393 from Patent EP1572962.
JD196042 - Sequence 177066 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: LOC145783, NR_015419
UCSC ID: uc002adz.1
RefSeq Accession: NR_015419

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: NR_015419.1
exon count: 4CDS single in 3' UTR: no RNA size: 3017
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 364.50frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.