Human Gene CEP95 (uc002jeo.1)
Description: Homo sapiens centrosomal protein 95kDa (CEP95), mRNA.
Transcript (Including UTRs)
Position: hg19 chr17:62,528,957-62,532,633 Size: 3,677 Total Exon Count: 3 Strand: +
Coding Region
Position: hg19 chr17:62,528,989-62,530,933 Size: 1,945 Coding Exon Count: 3
Data last updated at UCSC: 2013-06-14
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
Common Gene Haplotype Alleles
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AK057326 - Homo sapiens cDNA FLJ32764 fis, clone TESTI2001829.AK290587 - Homo sapiens cDNA FLJ76049 complete cds.AK297409 - Homo sapiens cDNA FLJ54025 complete cds, highly similar to Coiled-coil domain-containing protein 45.BC009518 - Homo sapiens coiled-coil domain containing 45, mRNA (cDNA clone MGC:10965 IMAGE:3633884), complete cds.AL832822 - Homo sapiens mRNA; cDNA DKFZp667E1824 (from clone DKFZp667E1824).KJ895136 - Synthetic construct Homo sapiens clone ccsbBroadEn_04530 CEP95 gene, encodes complete protein.AF130069 - Homo sapiens clone FLB8436 PRO2277 mRNA, complete cds.BX641136 - Homo sapiens mRNA; cDNA DKFZp686H24132 (from clone DKFZp686H24132).BC029461 - Homo sapiens coiled-coil domain containing 45, mRNA (cDNA clone IMAGE:4663179), with apparent retained intron.
Other Names for This Gene
Alternate Gene Symbols: AF130069UCSC ID: uc002jeo.1RefSeq Accession: NM_138363
Gene Model Information
category:
coding
nonsense-mediated-decay:
no
RNA accession:
AF130069.2
exon count:
3 CDS single in 3' UTR:
no
RNA size:
2039
ORF size:
444 CDS single in intron:
no
Alignment % ID:
99.95
txCdsPredict score:
988.00 frame shift in genome:
no
% Coverage:
99.41
has start codon:
yes
stop codon in genome:
no
# of Alignments:
1
has end codon:
yes
retained intron:
no
# AT/AC introns
0
selenocysteine:
no
end bleed into intron:
0 # strange splices:
0
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Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.