Human Gene RP11-552F3.12 (uc002jqa.1)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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AB058766 - Homo sapiens mRNA for KIAA1863 protein, partial cds. BC023549 - Homo sapiens Fas (TNFRSF6) binding factor 1, mRNA (cDNA clone MGC:16590 IMAGE:4109753), complete cds. AK074045 - Homo sapiens mRNA for FLJ00103 protein. AB354594 - Homo sapiens mRNA for Albatross, complete cds. CU692796 - Synthetic construct Homo sapiens gateway clone IMAGE:100022018 5' read FBF1 mRNA. AF161380 - Homo sapiens HSPC262 mRNA, partial cds. BC013311 - Homo sapiens mitochondrial ribosomal protein L38, mRNA (cDNA clone MGC:4810 IMAGE:3546083), complete cds. AK024058 - Homo sapiens cDNA FLJ13996 fis, clone Y79AA1002211, highly similar to Homo sapiens mitochondrial ribosomal protein L38 (MRPL38), nuclear gene encoding mitochondrial protein, mRNA. AK313283 - Homo sapiens cDNA, FLJ93795, Homo sapiens mitochondrial ribosomal protein L38 (MRPL38), nucleargene encoding mitochondrial protein, mRNA. HQ447208 - Synthetic construct Homo sapiens clone IMAGE:100070507; CCSB006124_01 mitochondrial ribosomal protein L38 (MRPL38) gene, encodes complete protein. KJ903112 - Synthetic construct Homo sapiens clone ccsbBroadEn_12506 MRPL38 gene, encodes complete protein. BC034460 - Homo sapiens mitochondrial ribosomal protein L38, mRNA (cDNA clone IMAGE:5182345). BC007570 - Homo sapiens Fas (TNFRSF6) binding factor 1, mRNA (cDNA clone IMAGE:3029289), partial cds. AK057261 - Homo sapiens cDNA FLJ32699 fis, clone TESTI2000435, weakly similar to CALDESMON. BC012332 - Homo sapiens Fas (TNFRSF6) binding factor 1, mRNA (cDNA clone IMAGE:4562904), partial cds. KJ904933 - Synthetic construct Homo sapiens clone ccsbBroadEn_14327 FBF1 gene, encodes complete protein. JD274976 - Sequence 256000 from Patent EP1572962. JD539814 - Sequence 520838 from Patent EP1572962. JD422182 - Sequence 403206 from Patent EP1572962. JD260461 - Sequence 241485 from Patent EP1572962. JD176968 - Sequence 157992 from Patent EP1572962. JD339877 - Sequence 320901 from Patent EP1572962. JD461753 - Sequence 442777 from Patent EP1572962. JD470802 - Sequence 451826 from Patent EP1572962. JD393067 - Sequence 374091 from Patent EP1572962. JD064164 - Sequence 45188 from Patent EP1572962. JD466017 - Sequence 447041 from Patent EP1572962. JD068495 - Sequence 49519 from Patent EP1572962. JD178054 - Sequence 159078 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: AB058766, FBF1 UCSC ID: uc002jqa.1 RefSeq Accession: NM_001080542
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| AB058766.1
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exon count:
| 32 | CDS single in 3' UTR:
| no
| RNA size:
| 4270 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.93 |
txCdsPredict score:
| 2380.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 82 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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