Human Gene DSCAM-AS1 (uc002yys.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
- C532162
2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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AF401032 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. AF401034 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. AF401031 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. AF401029 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. AF401030 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. AF401033 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. AF401035 - Homo sapiens M41 mRNA, complete sequence; alternatively spliced. JD238310 - Sequence 219334 from Patent EP1572962. JD238311 - Sequence 219335 from Patent EP1572962. JD457006 - Sequence 438030 from Patent EP1572962. JD117499 - Sequence 98523 from Patent EP1572962. JD554160 - Sequence 535184 from Patent EP1572962. JD106586 - Sequence 87610 from Patent EP1572962. JD106587 - Sequence 87611 from Patent EP1572962. JD418327 - Sequence 399351 from Patent EP1572962. BC071816 - Homo sapiens cDNA clone IMAGE:6560274, partial cds.
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Other Names for This Gene
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Alternate Gene Symbols: NR_038896 UCSC ID: uc002yys.3 RefSeq Accession: NR_038896
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Gene Model Information
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category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_038896.1
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exon count:
| 3 | CDS single in 3' UTR:
| no
| RNA size:
| 1640 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 215.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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