Human Gene ZNF721 (uc003gag.4)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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Common Gene Haplotype Alleles
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Press "+" in the title bar above to open this section.
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
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The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
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Protein Domain and Structure Information
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Pfam Domains: PF00096 - Zinc finger, C2H2 type
PF13912 - C2H2-type zinc finger
PF16622 - zinc-finger C2H2-type
SCOP Domains: 48695 - Multiheme cytochromes
57667 - C2H2 and C2HC zinc fingers
57889 - Cysteine-rich domain
ModBase Predicted Comparative 3D Structure on Q8TF20-2
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC036795 - Homo sapiens, clone IMAGE:5590487, mRNA. AK024359 - Homo sapiens cDNA FLJ14297 fis, clone PLACE1008941. BC098116 - Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene), mRNA (cDNA clone IMAGE:40024290). BC098259 - Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene), mRNA (cDNA clone IMAGE:40024295). BC098291 - Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene), mRNA (cDNA clone IMAGE:40024296), containing frame-shift errors. BC099730 - Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene), mRNA (cDNA clone IMAGE:40024298). BC105084 - Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene), mRNA (cDNA clone IMAGE:8144087). BC112069 - Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene), mRNA (cDNA clone IMAGE:8327537). BC143677 - Homo sapiens cDNA clone IMAGE:9052191. AK303674 - Homo sapiens cDNA FLJ57767 complete cds, moderately similar to Zinc finger protein 141. AL834155 - Homo sapiens mRNA; cDNA DKFZp761O0611 (from clone DKFZp761O0611). AK095689 - Homo sapiens cDNA FLJ38370 fis, clone FEBRA2001869, weakly similar to ZINC FINGER PROTEIN 44. AB075862 - Homo sapiens mRNA for KIAA1982 protein. AK128499 - Homo sapiens cDNA FLJ46649 fis, clone TRACH3004424, moderately similar to Zinc finger protein 91. AK092362 - Homo sapiens cDNA FLJ35043 fis, clone OCBBF2017536, weakly similar to Homo sapiens C2H2 (Kruppel-type) zinc finger protein mRNA. AX747501 - Sequence 1026 from Patent EP1308459. AK095558 - Homo sapiens cDNA FLJ38239 fis, clone FCBBF2005909, weakly similar to ZINC FINGER PROTEIN 44. AK127067 - Homo sapiens cDNA FLJ45124 fis, clone BRAWH3036334, moderately similar to Zinc finger protein 91. JD179301 - Sequence 160325 from Patent EP1572962. JD481205 - Sequence 462229 from Patent EP1572962. JD314877 - Sequence 295901 from Patent EP1572962. JD314879 - Sequence 295903 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD314877 - Sequence 295901 from Patent EP1572962. JD314879 - Sequence 295903 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD314877 - Sequence 295901 from Patent EP1572962. JD314879 - Sequence 295903 from Patent EP1572962. JD314873 - Sequence 295897 from Patent EP1572962. JD314874 - Sequence 295898 from Patent EP1572962. JD314875 - Sequence 295899 from Patent EP1572962. JD314879 - Sequence 295903 from Patent EP1572962. JD314878 - Sequence 295902 from Patent EP1572962. JD314877 - Sequence 295901 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD314884 - Sequence 295908 from Patent EP1572962. JD314873 - Sequence 295897 from Patent EP1572962. JD314874 - Sequence 295898 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD314878 - Sequence 295902 from Patent EP1572962. JD314878 - Sequence 295902 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD442012 - Sequence 423036 from Patent EP1572962. JD314884 - Sequence 295908 from Patent EP1572962. JD066994 - Sequence 48018 from Patent EP1572962. JD330516 - Sequence 311540 from Patent EP1572962. JD330513 - Sequence 311537 from Patent EP1572962. JD330514 - Sequence 311538 from Patent EP1572962. JD330515 - Sequence 311539 from Patent EP1572962. JD314878 - Sequence 295902 from Patent EP1572962. JD314898 - Sequence 295922 from Patent EP1572962. JD314899 - Sequence 295923 from Patent EP1572962. JD314900 - Sequence 295924 from Patent EP1572962. BC060316 - Homo sapiens cDNA clone IMAGE:3882186, partial cds. BC065035 - Homo sapiens cDNA clone IMAGE:6171511, partial cds. JD435224 - Sequence 416248 from Patent EP1572962. JD102297 - Sequence 83321 from Patent EP1572962. JD392731 - Sequence 373755 from Patent EP1572962. BC040413 - Homo sapiens, clone IMAGE:5186165, mRNA. JD516749 - Sequence 497773 from Patent EP1572962. AK021514 - Homo sapiens cDNA FLJ11452 fis, clone HEMBA1001435.
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Biochemical and Signaling Pathways
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Other Names for This Gene
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Alternate Gene Symbols: KIAA1982, NM_133474, NP_597731, Q8TF20-2, uc003gag.3 UCSC ID: uc003gag.4 RefSeq Accession: NM_133474
Protein: Q8TF20-2, splice isoform of Q8TF20
CCDS: CCDS46991.1
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Gene Model Information
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category:
| coding
| nonsense-mediated-decay:
| no
| RNA accession:
| NM_133474.3
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exon count:
| 3 | CDS single in 3' UTR:
| no
| RNA size:
| 4696 |
ORF size:
| 2772 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 5672.00 | frame shift in genome:
| no
| % Coverage:
| 99.91 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 4359 | # strange splices:
| 0 |
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for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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