Human Gene MTHFD2L (uc003hhs.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Genetic Association Studies of Complex Diseases and Disorders
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Genetic Association Database (archive): MTHFD2L
CDC HuGE Published Literature: MTHFD2L
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Comparative Toxicogenomics Database (CTD)
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC032771 - Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like, mRNA (cDNA clone IMAGE:3885359), complete cds. KJ904300 - Synthetic construct Homo sapiens clone ccsbBroadEn_13694 MTHFD2L gene, encodes complete protein. CU689528 - Synthetic construct Homo sapiens gateway clone IMAGE:100017927 5' read MTHFD2L mRNA. AX794781 - Sequence 8 from Patent WO03052093. AX794785 - Sequence 12 from Patent WO03052093. AX794782 - Sequence 9 from Patent WO03052093. BC037529 - Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like, mRNA (cDNA clone IMAGE:4794959), complete cds. BC041943 - Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like, mRNA (cDNA clone IMAGE:5301277). AX794779 - Sequence 6 from Patent WO03052093. JD187475 - Sequence 168499 from Patent EP1572962. JD339077 - Sequence 320101 from Patent EP1572962. JD236847 - Sequence 217871 from Patent EP1572962. JD267309 - Sequence 248333 from Patent EP1572962. AK021544 - Homo sapiens cDNA FLJ11482 fis, clone HEMBA1001820. JD096372 - Sequence 77396 from Patent EP1572962. JD308832 - Sequence 289856 from Patent EP1572962. JD332023 - Sequence 313047 from Patent EP1572962.
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Biochemical and Signaling Pathways
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KEGG - Kyoto Encyclopedia of Genes and Genomes hsa00630 - Glyoxylate and dicarboxylate metabolism hsa00670 - One carbon pool by folate hsa01100 - Metabolic pathways
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Other Names for This Gene
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Alternate Gene Symbols: BC037529 UCSC ID: uc003hhs.2 RefSeq Accession: NM_001144978
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| no
| RNA accession:
| BC037529.2
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exon count:
| 7 | CDS single in 3' UTR:
| no
| RNA size:
| 2072 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.75 |
txCdsPredict score:
| 234.00 | frame shift in genome:
| no
| % Coverage:
| 90.88 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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