The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
ModBase Predicted Comparative 3D Structure on Q86T20
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Gene Ontology (GO) Annotations with Structured Vocabulary
Cellular Component: GO:0005576 extracellular region
Descriptions from all associated GenBank mRNAs
AK290164 - Homo sapiens cDNA FLJ76010 complete cds. BC047919 - Homo sapiens chromosome 6 open reading frame 1, mRNA (cDNA clone MGC:57858 IMAGE:6190218), complete cds. BC023627 - Homo sapiens chromosome 6 open reading frame 1, mRNA (cDNA clone MGC:23478 IMAGE:4764944), complete cds. BC009526 - Homo sapiens chromosome 6 open reading frame 1, mRNA (cDNA clone IMAGE:3890372), with apparent retained intron. JD235146 - Sequence 216170 from Patent EP1572962. DL491604 - Novel nucleic acids. DL490199 - Novel nucleic acids. JD391892 - Sequence 372916 from Patent EP1572962. JD404011 - Sequence 385035 from Patent EP1572962. JD100157 - Sequence 81181 from Patent EP1572962. KJ900479 - Synthetic construct Homo sapiens clone ccsbBroadEn_09873 C6orf1 gene, encodes complete protein.