The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on P0C881
Front
Top
Side
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
BC044242 - Homo sapiens radial spoke head 10 homolog B2 (Chlamydomonas), mRNA (cDNA clone IMAGE:5753714), complete cds. BC034495 - Homo sapiens radial spoke head 10 homolog B (Chlamydomonas), mRNA (cDNA clone MGC:26728 IMAGE:4825868), complete cds. JD054963 - Sequence 35987 from Patent EP1572962. JD051896 - Sequence 32920 from Patent EP1572962. AK093411 - Homo sapiens cDNA FLJ36092 fis, clone TESTI2020525, weakly similar to Phosphatidylinositol-4-phosphate 5-kinase homolog T3K9.2. AX748110 - Sequence 1635 from Patent EP1308459. JD452434 - Sequence 433458 from Patent EP1572962. BC157864 - Homo sapiens radial spoke head 10 homolog B (Chlamydomonas), mRNA (cDNA clone MGC:189759 IMAGE:9057083), complete cds. BC157871 - Homo sapiens radial spoke head 10 homolog B (Chlamydomonas), mRNA (cDNA clone MGC:189766 IMAGE:9057090), complete cds. AK314983 - Homo sapiens cDNA, FLJ95901. KJ904047 - Synthetic construct Homo sapiens clone ccsbBroadEn_13441 RSPH10B gene, encodes complete protein. AK294481 - Homo sapiens cDNA FLJ54347 complete cds. KJ904345 - Synthetic construct Homo sapiens clone ccsbBroadEn_13739 RSPH10B2 gene, encodes complete protein. CU692192 - Synthetic construct Homo sapiens gateway clone IMAGE:100021340 5' read RSPH10B mRNA. CU689906 - Synthetic construct Homo sapiens gateway clone IMAGE:100020419 5' read RSPH10B mRNA.