Human Gene NSUN5P2 (uc003twl.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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MalaCards Disease Associations
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC056405 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:5216240), complete cds. BC007488 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:3634684). BC082753 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone MGC:99493 IMAGE:4542435), complete cds. BC106049 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:4938180), partial cds. BC050591 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:6526590), containing frame-shift errors. BC066297 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:4797351), with apparent retained intron. AF416611 - Homo sapiens Williams-Beuren Syndrome critical region protein 20 copy C (WBSCR20C) mRNA, complete cds. AL833016 - Homo sapiens mRNA; cDNA DKFZp666P104 (from clone DKFZp666P104). AF420250 - Homo sapiens NOL1R2 mRNA, complete cds. AK021688 - Homo sapiens cDNA FLJ11626 fis, clone HEMBA1004203, weakly similar to NUCLEOLAR PROTEIN NOP2. AL117583 - Homo sapiens mRNA; cDNA DKFZp434K058 (from clone DKFZp434K058). BC107111 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:40022621), complete cds. JD023112 - Sequence 4136 from Patent EP1572962. JD056174 - Sequence 37198 from Patent EP1572962. JD099106 - Sequence 80130 from Patent EP1572962. KJ901192 - Synthetic construct Homo sapiens clone ccsbBroadEn_10586 NSUN5P2 gene, encodes complete protein. JD470616 - Sequence 451640 from Patent EP1572962. JD329446 - Sequence 310470 from Patent EP1572962. JD027804 - Sequence 8828 from Patent EP1572962. JD195000 - Sequence 176024 from Patent EP1572962. JD436549 - Sequence 417573 from Patent EP1572962. AK292107 - Homo sapiens cDNA FLJ75140 complete cds. JD387363 - Sequence 368387 from Patent EP1572962. JD387362 - Sequence 368386 from Patent EP1572962. JD450813 - Sequence 431837 from Patent EP1572962. JD098523 - Sequence 79547 from Patent EP1572962. JD412971 - Sequence 393995 from Patent EP1572962. JD164719 - Sequence 145743 from Patent EP1572962. JD298413 - Sequence 279437 from Patent EP1572962. JD239371 - Sequence 220395 from Patent EP1572962. JD557575 - Sequence 538599 from Patent EP1572962. BC093976 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:7939821), complete cds. BC101515 - Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA clone IMAGE:8069021), complete cds. KJ906471 - Synthetic construct Homo sapiens clone ccsbBroadEn_16141 NSUN5P2 gene, encodes complete protein. JD125982 - Sequence 107006 from Patent EP1572962. AK315927 - Homo sapiens cDNA, FLJ78826 complete cds, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 5 (NSUN5), transcript variant 1, mRNA. KJ906470 - Synthetic construct Homo sapiens clone ccsbBroadEn_16140 NSUN5P2 gene, encodes complete protein. AK303622 - Homo sapiens cDNA FLJ58870 complete cds, highly similar to Homo sapiens NOL1/NOP2/Sun domain family, member 5 (NSUN5), transcript variant 1, mRNA. JD170416 - Sequence 151440 from Patent EP1572962. JD333379 - Sequence 314403 from Patent EP1572962. JD152523 - Sequence 133547 from Patent EP1572962. JD547473 - Sequence 528497 from Patent EP1572962. JD101352 - Sequence 82376 from Patent EP1572962. JD401236 - Sequence 382260 from Patent EP1572962. JD392224 - Sequence 373248 from Patent EP1572962. JD493006 - Sequence 474030 from Patent EP1572962. JD546840 - Sequence 527864 from Patent EP1572962. JD112674 - Sequence 93698 from Patent EP1572962. JD389803 - Sequence 370827 from Patent EP1572962. JD500846 - Sequence 481870 from Patent EP1572962. JD137007 - Sequence 118031 from Patent EP1572962. JD132083 - Sequence 113107 from Patent EP1572962. JD377267 - Sequence 358291 from Patent EP1572962. JD273124 - Sequence 254148 from Patent EP1572962. JD207771 - Sequence 188795 from Patent EP1572962. JD402739 - Sequence 383763 from Patent EP1572962. JD071410 - Sequence 52434 from Patent EP1572962. JD287893 - Sequence 268917 from Patent EP1572962. JD358368 - Sequence 339392 from Patent EP1572962. JD383942 - Sequence 364966 from Patent EP1572962. JD383941 - Sequence 364965 from Patent EP1572962. JD163393 - Sequence 144417 from Patent EP1572962. JD468097 - Sequence 449121 from Patent EP1572962. JD408675 - Sequence 389699 from Patent EP1572962. JD227864 - Sequence 208888 from Patent EP1572962. JD487901 - Sequence 468925 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: BC106049 UCSC ID: uc003twl.3 RefSeq Accession: NR_033323
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| no
| RNA accession:
| BC106049.1
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exon count:
| 7 | CDS single in 3' UTR:
| no
| RNA size:
| 1349 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.77 |
txCdsPredict score:
| 336.00 | frame shift in genome:
| no
| % Coverage:
| 98.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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