Human Gene PMS2P1 (uc003uuh.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC110395 - Homo sapiens postmeiotic segregation increased 2-like 1 pseudogene, mRNA (cDNA clone IMAGE:5216781). BC038996 - Homo sapiens postmeiotic segregation increased 2-like 1, mRNA (cDNA clone IMAGE:6059073), with apparent retained intron. LP896486 - Sequence 1350 from Patent EP3253886. JD487137 - Sequence 468161 from Patent EP1572962. JD299630 - Sequence 280654 from Patent EP1572962. BC067809 - Homo sapiens postmeiotic segregation increased 2-like 1 pseudogene, mRNA (cDNA clone IMAGE:5284726). D38435 - Homo sapiens hPMS3 mRNA, partial cds. D38499 - Homo sapiens PMS3 mRNA (yeast mismatch repair gene PMS1 homologue), partial cds (C-terminal region). E11276 - Human cDNA encoding mismatch repair-related protein. AB017004 - Homo sapiens PMS2L13 mRNA, partial cds. JD525835 - Sequence 506859 from Patent EP1572962. JD489553 - Sequence 470577 from Patent EP1572962. JD545788 - Sequence 526812 from Patent EP1572962. BC044214 - Homo sapiens postmeiotic segregation increased 2-like 1, mRNA (cDNA clone IMAGE:6049115), partial cds. JD415816 - Sequence 396840 from Patent EP1572962. JD397410 - Sequence 378434 from Patent EP1572962. JD143902 - Sequence 124926 from Patent EP1572962. JD304835 - Sequence 285859 from Patent EP1572962. DQ595418 - Homo sapiens piRNA piR-61530, complete sequence. DQ577017 - Homo sapiens piRNA piR-45129, complete sequence. D38440 - Homo sapiens hPMS8 mRNA, partial cds. D38503 - Homo sapiens PMS8 mRNA (yeast mismatch repair gene PMS1 homologue), partial cds (C-terminal region). E11281 - Human cDNA encoding mismatch repair-related protein. DQ573916 - Homo sapiens piRNA piR-42028, complete sequence. AB103084 - Homo sapiens PMS2 mRNA for postmeiotic segregation increased 2 nirs variant 3, complete cds. JD538559 - Sequence 519583 from Patent EP1572962. JD316586 - Sequence 297610 from Patent EP1572962. JD215924 - Sequence 196948 from Patent EP1572962. JD277168 - Sequence 258192 from Patent EP1572962. JD187252 - Sequence 168276 from Patent EP1572962. JD038365 - Sequence 19389 from Patent EP1572962. JD167920 - Sequence 148944 from Patent EP1572962. JD438004 - Sequence 419028 from Patent EP1572962. JD142643 - Sequence 123667 from Patent EP1572962. JD137848 - Sequence 118872 from Patent EP1572962. JD460644 - Sequence 441668 from Patent EP1572962. JD516525 - Sequence 497549 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: NR_003613 UCSC ID: uc003uuh.2 RefSeq Accession: NR_003613
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Gene Model Information
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category:
| antisense
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_003613.1
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exon count:
| 7 | CDS single in 3' UTR:
| no
| RNA size:
| 1518 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 379.50 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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