Human Gene MIGA2 (uc004bwy.3)
  Description: Homo sapiens family with sequence similarity 73, member B (MIGA2), mRNA.
Transcript (Including UTRs)
   Position: hg19 chr9:131,798,923-131,834,351 Size: 35,429 Total Exon Count: 17 Strand: +


Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr9:131,798,923-131,834,351)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
EnsemblExonPrimerGeneNetworkH-INVLynxPubMed
Wikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 21.04 RPKM in Brain - Cerebellum
Total median expression: 505.03 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK074127 - Homo sapiens mRNA for FLJ00199 protein.
AK075421 - Homo sapiens cDNA PSEC0112 fis, clone NT2RP2006400.
AK301241 - Homo sapiens cDNA FLJ57210 complete cds.
AK303036 - Homo sapiens cDNA FLJ61502 complete cds.
BC009114 - Homo sapiens family with sequence similarity 73, member B, mRNA (cDNA clone MGC:18133 IMAGE:4153683), complete cds.
JD282637 - Sequence 263661 from Patent EP1572962.
JD445616 - Sequence 426640 from Patent EP1572962.
JD057699 - Sequence 38723 from Patent EP1572962.
JD159341 - Sequence 140365 from Patent EP1572962.
JD159342 - Sequence 140366 from Patent EP1572962.
JD076202 - Sequence 57226 from Patent EP1572962.
JD173530 - Sequence 154554 from Patent EP1572962.
JD294938 - Sequence 275962 from Patent EP1572962.
JD483990 - Sequence 465014 from Patent EP1572962.
JD206592 - Sequence 187616 from Patent EP1572962.
JD065026 - Sequence 46050 from Patent EP1572962.
JD139435 - Sequence 120459 from Patent EP1572962.
JD335620 - Sequence 316644 from Patent EP1572962.
JD104882 - Sequence 85906 from Patent EP1572962.
JD239224 - Sequence 220248 from Patent EP1572962.
JD470056 - Sequence 451080 from Patent EP1572962.
JD152375 - Sequence 133399 from Patent EP1572962.
JD533844 - Sequence 514868 from Patent EP1572962.
JD469012 - Sequence 450036 from Patent EP1572962.
JD521646 - Sequence 502670 from Patent EP1572962.
AK027502 - Homo sapiens cDNA FLJ14596 fis, clone NT2RM4002266.
JD386630 - Sequence 367654 from Patent EP1572962.
JD218333 - Sequence 199357 from Patent EP1572962.
JD439932 - Sequence 420956 from Patent EP1572962.
JD199921 - Sequence 180945 from Patent EP1572962.
CU679253 - Synthetic construct Homo sapiens gateway clone IMAGE:100016781 5' read FAM73B mRNA.
KJ903479 - Synthetic construct Homo sapiens clone ccsbBroadEn_12873 FAM73B gene, encodes complete protein.
AK054974 - Homo sapiens cDNA FLJ30412 fis, clone BRACE2008653.
JD355997 - Sequence 337021 from Patent EP1572962.
JD480324 - Sequence 461348 from Patent EP1572962.
JD331242 - Sequence 312266 from Patent EP1572962.
JD486732 - Sequence 467756 from Patent EP1572962.
JD484829 - Sequence 465853 from Patent EP1572962.
JD045215 - Sequence 26239 from Patent EP1572962.
JD562280 - Sequence 543304 from Patent EP1572962.
JD496579 - Sequence 477603 from Patent EP1572962.
JD341278 - Sequence 322302 from Patent EP1572962.
JD231281 - Sequence 212305 from Patent EP1572962.
JD195002 - Sequence 176026 from Patent EP1572962.
JD254963 - Sequence 235987 from Patent EP1572962.
JD155245 - Sequence 136269 from Patent EP1572962.
JD064498 - Sequence 45522 from Patent EP1572962.
JD060688 - Sequence 41712 from Patent EP1572962.
AJ420465 - Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1673536.
JD122544 - Sequence 103568 from Patent EP1572962.
JD479198 - Sequence 460222 from Patent EP1572962.
JD466603 - Sequence 447627 from Patent EP1572962.
JD473168 - Sequence 454192 from Patent EP1572962.
JD497356 - Sequence 478380 from Patent EP1572962.
JD470376 - Sequence 451400 from Patent EP1572962.
JD393359 - Sequence 374383 from Patent EP1572962.
JD104652 - Sequence 85676 from Patent EP1572962.
JD191994 - Sequence 173018 from Patent EP1572962.
JD467358 - Sequence 448382 from Patent EP1572962.
JD193783 - Sequence 174807 from Patent EP1572962.
JD097836 - Sequence 78860 from Patent EP1572962.
JD324526 - Sequence 305550 from Patent EP1572962.
JD210114 - Sequence 191138 from Patent EP1572962.
JD085733 - Sequence 66757 from Patent EP1572962.
JD074817 - Sequence 55841 from Patent EP1572962.
JD475030 - Sequence 456054 from Patent EP1572962.
JD251643 - Sequence 232667 from Patent EP1572962.
JD320717 - Sequence 301741 from Patent EP1572962.
JD179021 - Sequence 160045 from Patent EP1572962.
JD477754 - Sequence 458778 from Patent EP1572962.
JD233392 - Sequence 214416 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AK074127, FAM73B
UCSC ID: uc004bwy.3
RefSeq Accession: NM_032809

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: yes RNA accession: AK074127.1
exon count: 17CDS single in 3' UTR: no RNA size: 4348
ORF size: 0CDS single in intron: no Alignment % ID: 99.84
txCdsPredict score: 1436.00frame shift in genome: no % Coverage: 99.89
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.