Description: Homo sapiens melanoma antigen family B, 10 (MAGEB10), mRNA. RefSeq Summary (NM_182506): This gene encodes a member of the B subfamily of the melanoma associated antigen protein family. The encoded protein is specifically expressed in testis and tumor cells. [provided by RefSeq, Apr 2010]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Transcript (Including UTRs) Position: hg19 chrX:27,826,107-27,841,131 Size: 15,025 Total Exon Count: 3 Strand: + Coding Region Position: hg19 chrX:27,839,424-27,840,467 Size: 1,044 Coding Exon Count: 1
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Pfam Domains: PF01454 - MAGE family PF12440 - Melanoma associated antigen family N terminal
ModBase Predicted Comparative 3D Structure on Q96LZ2
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
AK057527 - Homo sapiens cDNA FLJ32965 fis, clone TESTI2008657, moderately similar to MELANOMA-ASSOCIATED ANTIGEN B4. BC101307 - Homo sapiens melanoma antigen family B, 10, mRNA (cDNA clone MGC:120393 IMAGE:40024749), complete cds. BC101309 - Homo sapiens melanoma antigen family B, 10, mRNA (cDNA clone MGC:120395 IMAGE:40024752), complete cds. BC101310 - Homo sapiens melanoma antigen family B, 10, mRNA (cDNA clone MGC:120396 IMAGE:40024754), complete cds. BC101308 - Homo sapiens melanoma antigen family B, 10, mRNA (cDNA clone MGC:120394 IMAGE:40024751), complete cds. JD541346 - Sequence 522370 from Patent EP1572962. JD071489 - Sequence 52513 from Patent EP1572962. JD309686 - Sequence 290710 from Patent EP1572962. JD068442 - Sequence 49466 from Patent EP1572962. JD100795 - Sequence 81819 from Patent EP1572962. JD099785 - Sequence 80809 from Patent EP1572962. JD479940 - Sequence 460964 from Patent EP1572962. AB463873 - Synthetic construct DNA, clone: pF1KB7150, Homo sapiens MAGEB10 gene for melanoma antigen family B, 10, without stop codon, in Flexi system. KJ895534 - Synthetic construct Homo sapiens clone ccsbBroadEn_04928 MAGEB10 gene, encodes complete protein. JD067338 - Sequence 48362 from Patent EP1572962. JD530218 - Sequence 511242 from Patent EP1572962. JD487170 - Sequence 468194 from Patent EP1572962. JD511637 - Sequence 492661 from Patent EP1572962. JD136300 - Sequence 117324 from Patent EP1572962. JD243356 - Sequence 224380 from Patent EP1572962. JD444773 - Sequence 425797 from Patent EP1572962. JD177440 - Sequence 158464 from Patent EP1572962. JD182545 - Sequence 163569 from Patent EP1572962. JD512871 - Sequence 493895 from Patent EP1572962. JD097719 - Sequence 78743 from Patent EP1572962. JD100224 - Sequence 81248 from Patent EP1572962. JD056691 - Sequence 37715 from Patent EP1572962.