Human Gene WASH7P (uc009vis.3)
  Description: Homo sapiens WAS protein family homolog 7 pseudogene (WASH7P), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr1:14,362-16,765 Size: 2,404 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:14,362-16,765)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPEnsemblExonPrimerH-INVHGNCLynx
PubMed

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 13.25 RPKM in Prostate
Total median expression: 374.16 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC015400 - Homo sapiens WAS protein family homolog 2 pseudogene, mRNA (cDNA clone IMAGE:4156973).
BC110991 - Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:5241002).
BC073913 - Homo sapiens WAS protein family homolog 2 pseudogene, mRNA (cDNA clone IMAGE:5163655).
BC093083 - Homo sapiens WAS protein family homolog 2 pseudogene, mRNA (cDNA clone IMAGE:30388014).
BC063555 - Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:4940747).
BC063893 - Homo sapiens cDNA clone IMAGE:30368489, partial cds.
BC053987 - Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:5814725), partial cds.
BC048328 - Homo sapiens WAS protein family homolog 2 pseudogene, mRNA (cDNA clone IMAGE:5192099).
BC027921 - Homo sapiens cDNA clone IMAGE:5225823, **** WARNING: chimeric clone ****.
BC063470 - Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:5211206).
AL137714 - Homo sapiens mRNA; cDNA DKFZp434K1323 (from clone DKFZp434K1323).
BX537637 - Homo sapiens mRNA; cDNA DKFZp686C24272 (from clone DKFZp686C24272).
AK024481 - Homo sapiens mRNA for FLJ00075 protein, partial cds.
AK092583 - Homo sapiens cDNA FLJ35264 fis, clone PROST2004817.
AX747611 - Sequence 1136 from Patent EP1308459.
AK056232 - Homo sapiens cDNA FLJ31670 fis, clone NT2RI2004984.
BC094698 - Homo sapiens cDNA clone IMAGE:30389644.
BC041177 - Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:6042646), partial cds.
AY217347 - Homo sapiens unknown mRNA.
JD043865 - Sequence 24889 from Patent EP1572962.
JD464022 - Sequence 445046 from Patent EP1572962.
JD464023 - Sequence 445047 from Patent EP1572962.
JD426250 - Sequence 407274 from Patent EP1572962.
JD319762 - Sequence 300786 from Patent EP1572962.
JD439184 - Sequence 420208 from Patent EP1572962.
AK289708 - Homo sapiens cDNA FLJ75027 complete cds, highly similar to Homo sapiens CXYorf1-related protein (MGC52000), mRNA.
JD386972 - Sequence 367996 from Patent EP1572962.
JD469492 - Sequence 450516 from Patent EP1572962.
AY341937 - Homo sapiens chromosome 9 CXYorf1 mRNA, complete cds.
JD371043 - Sequence 352067 from Patent EP1572962.
JD186991 - Sequence 168015 from Patent EP1572962.
JD178321 - Sequence 159345 from Patent EP1572962.
JD371044 - Sequence 352068 from Patent EP1572962.
JD492409 - Sequence 473433 from Patent EP1572962.
JD248147 - Sequence 229171 from Patent EP1572962.
JD044295 - Sequence 25319 from Patent EP1572962.
JD433165 - Sequence 414189 from Patent EP1572962.
AK308566 - Homo sapiens cDNA, FLJ98607.
JD460507 - Sequence 441531 from Patent EP1572962.
AK302089 - Homo sapiens cDNA FLJ51139 complete cds.
AK308574 - Homo sapiens cDNA, FLJ98615.
JD389037 - Sequence 370061 from Patent EP1572962.
AK309926 - Homo sapiens cDNA, FLJ99967.
JD406735 - Sequence 387759 from Patent EP1572962.
AK310121 - Homo sapiens cDNA, FLJ17163.
AK316487 - Homo sapiens cDNA, FLJ79386 complete cds.
JD455749 - Sequence 436773 from Patent EP1572962.
JD115443 - Sequence 96467 from Patent EP1572962.
JD365642 - Sequence 346666 from Patent EP1572962.
JD123346 - Sequence 104370 from Patent EP1572962.
JD054019 - Sequence 35043 from Patent EP1572962.
JD309150 - Sequence 290174 from Patent EP1572962.
AK310139 - Homo sapiens cDNA, FLJ17181.

-  Other Names for This Gene
  Alternate Gene Symbols: BC047449
UCSC ID: uc009vis.3
RefSeq Accession: NR_024540

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: no RNA accession: BC047449.1
exon count: 4CDS single in 3' UTR: no RNA size: 1748
ORF size: 0CDS single in intron: no Alignment % ID: 98.96
txCdsPredict score: 614.00frame shift in genome: no % Coverage: 45.59
has start codon: no stop codon in genome: no # of Alignments: 3
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.