Human Gene ST7L (uc009wgi.1)
|
|
Sequence and Links to Tools and Databases
|
|
Primer design for this transcript
|
|
Comparative Toxicogenomics Database (CTD)
|
|
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
|
|
Microarray Expression Data
|
|
Press "+" in the title bar above to open this section.
| |
|
|
Orthologous Genes in Other Species
|
|
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
|
| |
|
|
Descriptions from all associated GenBank mRNAs
|
|
BX538338 - Homo sapiens mRNA; cDNA DKFZp686O14208 (from clone DKFZp686O14208). BC047392 - Homo sapiens suppression of tumorigenicity 7 like, mRNA (cDNA clone MGC:48464 IMAGE:5273549), complete cds. BX537988 - Homo sapiens mRNA; cDNA DKFZp686N2430 (from clone DKFZp686N2430); complete cds. AK095837 - Homo sapiens cDNA FLJ38518 fis, clone HCHON2000738, highly similar to Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 3, mRNA. AK021719 - Homo sapiens cDNA FLJ11657 fis, clone HEMBA1004573, weakly similar to Homo sapiens mRNA for HELG protein. AK295955 - Homo sapiens cDNA FLJ60584 complete cds, highly similar to Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 2, mRNA. AK295507 - Homo sapiens cDNA FLJ60556 complete cds, highly similar to Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 2, mRNA. BC065501 - Homo sapiens suppression of tumorigenicity 7 like, mRNA (cDNA clone MGC:70568 IMAGE:4417786), complete cds. AK097837 - Homo sapiens cDNA FLJ40518 fis, clone TESTI2046721, highly similar to Homo sapiens mRNA for HELG protein. AB081317 - Homo sapiens ST7L mRNA for ST7L isoform 1, complete cds. AK291042 - Homo sapiens cDNA FLJ76280 complete cds, highly similar to Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 1, mRNA. AB081318 - Homo sapiens ST7L mRNA for ST7L isoform 2, complete cds. AB081319 - Homo sapiens ST7L mRNA for ST7L isoform 3, complete cds. KJ894079 - Synthetic construct Homo sapiens clone ccsbBroadEn_03473 ST7L gene, encodes complete protein. BC027898 - Homo sapiens cDNA clone IMAGE:5228023. BX640667 - Homo sapiens mRNA; cDNA DKFZp686N05164 (from clone DKFZp686N05164); complete cds. AK301869 - Homo sapiens cDNA FLJ55859 complete cds, highly similar to Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 4, mRNA. BC037830 - Homo sapiens suppression of tumorigenicity 7 like, mRNA (cDNA clone MGC:42217 IMAGE:4812133), complete cds. AB081320 - Homo sapiens ST7L mRNA for ST7L isoform 4, complete cds. EU831659 - Synthetic construct Homo sapiens clone HAIB:100066688; DKFZo007G1019 suppression of tumorigenicity 7 like protein (ST7L) gene, encodes complete protein. EU831742 - Synthetic construct Homo sapiens clone HAIB:100066771; DKFZo003G1020 suppression of tumorigenicity 7 like protein (ST7L) gene, encodes complete protein. AK308727 - Homo sapiens cDNA, FLJ98768. AK304004 - Homo sapiens cDNA FLJ59279 complete cds, highly similar to Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 2, mRNA. AK000291 - Homo sapiens cDNA FLJ20284 fis, clone HEP04227. AK225307 - Homo sapiens mRNA for suppression of tumorigenicity 7-like isoform 2 variant, clone: HEP04227. CU688054 - Synthetic construct Homo sapiens gateway clone IMAGE:100021765 5' read ST7L mRNA. DQ572500 - Homo sapiens piRNA piR-40612, complete sequence. JD227376 - Sequence 208400 from Patent EP1572962.
| |
|
|
Other Names for This Gene
|
|
Alternate Gene Symbols: AK308727 UCSC ID: uc009wgi.1 RefSeq Accession: NM_138729
| |
|
|
Gene Model Information
|
|
category:
| nearCoding
| nonsense-mediated-decay:
| no
| RNA accession:
| AK308727.1
|
exon count:
| 12 | CDS single in 3' UTR:
| no
| RNA size:
| 1395 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 226.00 | frame shift in genome:
| no
| % Coverage:
| 99.71 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
|
Click here
for a detailed description of the fields of the table above.
| |
|
|
Methods, Credits, and Use Restrictions
|
|
Click here
for details on how this gene model was made and data restrictions if any.
| |
|
|
|