Human Gene TMTC3 (uc009zsm.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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MalaCards Disease Associations
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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AK310393 - Homo sapiens cDNA, FLJ17435. AK310375 - Homo sapiens cDNA, FLJ17417. AK290436 - Homo sapiens cDNA FLJ78524 complete cds, highly similar to Homo sapiens SMILE protein (SMILE), mRNA. AK302755 - Homo sapiens cDNA FLJ52097 complete cds, weakly similar to Homo sapiens transmembrane and tetratricopeptide repeat containing 1 (TMTC1), mRNA. CR749309 - Homo sapiens mRNA; cDNA DKFZp686O22167 (from clone DKFZp686O22167). BX538169 - Homo sapiens mRNA; cDNA DKFZp686I16123 (from clone DKFZp686I16123); complete cds. JD437346 - Sequence 418370 from Patent EP1572962. JD044283 - Sequence 25307 from Patent EP1572962. CR749244 - Homo sapiens mRNA; cDNA DKFZp686M1969 (from clone DKFZp686M1969). CR933632 - Homo sapiens mRNA; cDNA DKFZp686C0968 (from clone DKFZp686C0968). JD329294 - Sequence 310318 from Patent EP1572962. AJ697717 - Homo sapiens mRNA for SMILE protein. BC117177 - Homo sapiens transmembrane and tetratricopeptide repeat containing 3, mRNA (cDNA clone MGC:150786 IMAGE:40125728), complete cds. BC117175 - Homo sapiens transmembrane and tetratricopeptide repeat containing 3, mRNA (cDNA clone MGC:150784 IMAGE:40125726), complete cds. LF211709 - JP 2014500723-A/19212: Polycomb-Associated Non-Coding RNAs. AM393797 - Synthetic construct Homo sapiens clone IMAGE:100002236 for hypothetical protein (TMTC3 gene). HQ258675 - Synthetic construct Homo sapiens clone IMAGE:100072705 transmembrane and tetratricopeptide repeat containing 3 (TMTC3) gene, encodes complete protein. KJ895713 - Synthetic construct Homo sapiens clone ccsbBroadEn_05107 TMTC3 gene, encodes complete protein. AK074973 - Homo sapiens cDNA FLJ90492 fis, clone NT2RP3003535, weakly similar to UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KD SUBUNIT (EC 2.4.1.-). LF382927 - JP 2014500723-A/190430: Polycomb-Associated Non-Coding RNAs. JD243982 - Sequence 225006 from Patent EP1572962. JD089713 - Sequence 70737 from Patent EP1572962. JD147104 - Sequence 128128 from Patent EP1572962. LF382926 - JP 2014500723-A/190429: Polycomb-Associated Non-Coding RNAs. LF382925 - JP 2014500723-A/190428: Polycomb-Associated Non-Coding RNAs. CR936640 - Homo sapiens mRNA; cDNA DKFZp686O2342 (from clone DKFZp686O2342). LF382924 - JP 2014500723-A/190427: Polycomb-Associated Non-Coding RNAs. MA618504 - JP 2018138019-A/190430: Polycomb-Associated Non-Coding RNAs. MA618503 - JP 2018138019-A/190429: Polycomb-Associated Non-Coding RNAs. MA618502 - JP 2018138019-A/190428: Polycomb-Associated Non-Coding RNAs. MA618501 - JP 2018138019-A/190427: Polycomb-Associated Non-Coding RNAs. MA447286 - JP 2018138019-A/19212: Polycomb-Associated Non-Coding RNAs.
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Other Names for This Gene
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Alternate Gene Symbols: AK310375 UCSC ID: uc009zsm.2 RefSeq Accession: NM_181783
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| AK310375.1
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exon count:
| 12 | CDS single in 3' UTR:
| no
| RNA size:
| 1842 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.89 |
txCdsPredict score:
| 2137.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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