Human Gene ZNF280D (uc010bfp.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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MalaCards Disease Associations
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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LF208550 - JP 2014500723-A/16053: Polycomb-Associated Non-Coding RNAs. BC040532 - Homo sapiens zinc finger protein 280D, mRNA (cDNA clone IMAGE:5261474). BX641000 - Homo sapiens mRNA; cDNA DKFZp686H13148 (from clone DKFZp686H13148); complete cds. AB046804 - Homo sapiens KIAA1584 mRNA for KIAA1584 protein. BC130451 - Homo sapiens zinc finger protein 280D, mRNA (cDNA clone MGC:163323 IMAGE:40146482), complete cds. BC136412 - Homo sapiens zinc finger protein 280D, mRNA (cDNA clone MGC:168023 IMAGE:9020400), complete cds. BX640707 - Homo sapiens mRNA; cDNA DKFZp686F11161 (from clone DKFZp686F11161); complete cds. AK295159 - Homo sapiens cDNA FLJ56078 complete cds, highly similar to Suppressor of hairy wing homolog 4. AK289739 - Homo sapiens cDNA FLJ76213 complete cds, highly similar to Homo sapiens suppressor of hairy wing homolog 4 (Drosophila) (SUHW4), transcript variant 2, mRNA. AM392650 - Synthetic construct Homo sapiens clone IMAGE:100002534 for hypothetical protein (SUHW4 gene). AM393745 - Synthetic construct Homo sapiens clone IMAGE:100002533 for hypothetical protein (SUHW4 gene). BX640637 - Homo sapiens mRNA; cDNA DKFZp779P138 (from clone DKFZp779P138); complete cds. BC036541 - Homo sapiens cDNA clone IMAGE:4829311. AK310882 - Homo sapiens cDNA, FLJ17924. MA444127 - JP 2018138019-A/16053: Polycomb-Associated Non-Coding RNAs. LF377638 - JP 2014500723-A/185141: Polycomb-Associated Non-Coding RNAs. AL136634 - Homo sapiens mRNA; cDNA DKFZp564H102 (from clone DKFZp564H102); complete cds. AK000093 - Homo sapiens cDNA FLJ20086 fis, clone COL03629. JD160480 - Sequence 141504 from Patent EP1572962. JD506801 - Sequence 487825 from Patent EP1572962. LF377637 - JP 2014500723-A/185140: Polycomb-Associated Non-Coding RNAs. JD347838 - Sequence 328862 from Patent EP1572962. JD509098 - Sequence 490122 from Patent EP1572962. JD285954 - Sequence 266978 from Patent EP1572962. AB385484 - Synthetic construct DNA, clone: pF1KA1584, Homo sapiens SUHW4 gene for suppressor of hairy wing homolog 4, complete cds, without stop codon, in Flexi system. LF377636 - JP 2014500723-A/185139: Polycomb-Associated Non-Coding RNAs. LF377635 - JP 2014500723-A/185138: Polycomb-Associated Non-Coding RNAs. JD378852 - Sequence 359876 from Patent EP1572962. LF377634 - JP 2014500723-A/185137: Polycomb-Associated Non-Coding RNAs. JD073517 - Sequence 54541 from Patent EP1572962. JD049286 - Sequence 30310 from Patent EP1572962. JD357787 - Sequence 338811 from Patent EP1572962. AK025073 - Homo sapiens cDNA: FLJ21420 fis, clone COL04105. LF377622 - JP 2014500723-A/185125: Polycomb-Associated Non-Coding RNAs. JD082130 - Sequence 63154 from Patent EP1572962. MA613215 - JP 2018138019-A/185141: Polycomb-Associated Non-Coding RNAs. MA613214 - JP 2018138019-A/185140: Polycomb-Associated Non-Coding RNAs. MA613213 - JP 2018138019-A/185139: Polycomb-Associated Non-Coding RNAs. MA613212 - JP 2018138019-A/185138: Polycomb-Associated Non-Coding RNAs. MA613211 - JP 2018138019-A/185137: Polycomb-Associated Non-Coding RNAs. MA613199 - JP 2018138019-A/185125: Polycomb-Associated Non-Coding RNAs.
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Other Names for This Gene
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Alternate Gene Symbols: AK000093 UCSC ID: uc010bfp.3 RefSeq Accession: NM_001002843
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| AK000093.1
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exon count:
| 14 | CDS single in 3' UTR:
| no
| RNA size:
| 3572 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.89 |
txCdsPredict score:
| 2425.00 | frame shift in genome:
| no
| % Coverage:
| 98.82 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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