Human Gene ADORA2A (uc010gup.3)
  Description: Homo sapiens adenosine A2a receptor (ADORA2A), mRNA.
RefSeq Summary (NM_000675): This gene encodes a member of the guanine nucleotide-binding protein (G protein)-coupled receptor (GPCR) superfamily, which is subdivided into classes and subtypes. The receptors are seven-pass transmembrane proteins that respond to extracellular cues and activate intracellular signal transduction pathways. This protein, an adenosine receptor of A2A subtype, uses adenosine as the preferred endogenous agonist and preferentially interacts with the G(s) and G(olf) family of G proteins to increase intracellular cAMP levels. It plays an important role in many biological functions, such as cardiac rhythm and circulation, cerebral and renal blood flow, immune function, pain regulation, and sleep. It has been implicated in pathophysiological conditions such as inflammatory diseases and neurodegenerative disorders. Alternative splicing results in multiple transcript variants. A read-through transcript composed of the upstream SPECC1L (sperm antigen with calponin homology and coiled-coil domains 1-like) and ADORA2A (adenosine A2a receptor) gene sequence has been identified, but it is thought to be non-coding. [provided by RefSeq, Jun 2013].
Transcript (Including UTRs)
   Position: hg19 chr22:24,828,087-24,838,325 Size: 10,239 Total Exon Count: 4 Strand: +
Coding Region
   Position: hg19 chr22:24,829,373-24,837,457 Size: 8,085 Coding Exon Count: 2 

Page IndexSequence and LinksUniProtKB CommentsPrimersGenetic AssociationsMalaCards
CTDGene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther NamesModel Information
Methods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr22:24,828,087-24,838,325)mRNA (may differ from genome)Protein (412 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
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H-INVHGNCHuman Cortex Gene ExpressionLynxMalacardsMGI
neXtProtOMIMPubMedReactomeTreefamUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: AA2AR_HUMAN
DESCRIPTION: RecName: Full=Adenosine receptor A2a;
FUNCTION: Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
SUBUNIT: Interacts (via cytoplasmic C-terminal domain) with USP4; the interaction is direct. May interact with DRD4.
INTERACTION: P30542:ADORA1; NbExp=4; IntAct=EBI-2902702, EBI-2903663; P62158:CALM3; NbExp=3; IntAct=EBI-2902702, EBI-397435; Q99418:CYTH2; NbExp=6; IntAct=EBI-2902702, EBI-448974; P14416:DRD2; NbExp=2; IntAct=EBI-2902702, EBI-2928178; P31424-1:Grm5 (xeno); NbExp=3; IntAct=EBI-2902702, EBI-2902778; Q7Z6G3:NECAB2; NbExp=5; IntAct=EBI-2902702, EBI-950070; Q13107:USP4; NbExp=4; IntAct=EBI-2902702, EBI-723290;
SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein.
DOMAIN: The cytoplasmic C-terminal domain is necessary for targeting the non-ubiquitinated form of this protein to the cell surface.
PTM: Ubiquitinated. Deubiquitinated by USP4; leading to stabilization and expression at the cell surface.
SIMILARITY: Belongs to the G-protein coupled receptor 1 family.
SEQUENCE CAUTION: Sequence=AAA58356.1; Type=Erroneous initiation;

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): ADORA2A
CDC HuGE Published Literature: ADORA2A
Positive Disease Associations: anxiety disorder , caffeine consumption , caffeine-induced anxiety. , migraine migraine with aura , panic disorder
Related Studies:
  1. anxiety disorder
    Alsene, K. et al. 2003, Association between A2a receptor gene polymorphisms and caffeine-induced anxiety., Neuropsychopharmacology. 2003 Sep;28(9):1694-702. [PubMed 12825092]
    The study shows that an adenosine receptor gene polymorphism that has been associated with Panic Disorder is also associated with anxiogenic responses to an acute dose of caffeine.
  2. caffeine consumption
    Cornelis, M. C. et al. 2007, Genetic polymorphism of the adenosine A2A receptor is associated with habitual caffeine consumption, Am J Clin Nutr 2007 86(1) 240-4. [PubMed 17616786]
    Our findings show that the probability of having the ADORA2A 1083TT genotype decreases as habitual caffeine consumption increases.
  3. caffeine-induced anxiety.
    Alsene K 2003, Association between A2a receptor gene polymorphisms and caffeine-induced anxiety., Neuropsychopharmacology. 2003 Sep;28(9):1694-702. [PubMed 12825092]
    The study shows that an adenosine receptor gene polymorphism that has been associated with Panic Disorder is also associated with anxiogenic responses to an acute dose of caffeine.
           more ... click here to view the complete list

-  MalaCards Disease Associations
  MalaCards Gene Search: ADORA2A
Diseases sorted by gene-association score: acute encephalopathy with biphasic seizures and late reduced diffusion* (25), normal pressure hydrocephalus (7), panic disorder (6), conduct disorder (5), parkinson disease, late-onset (5), basal ganglia disease (5), huntington disease (3), schizophrenia (1)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene
  • D002110 Caffeine
  • C061282 2-(4-(2-carboxyethyl)phenethylamino)-5'-N-ethylcarboxamidoadenosine
  • C098657 5-amino-7-(2-phenylethyl)-2-(2-furyl)pyrazolo(4,3-e)-1,2,4-triazolo(1,5-c)pyrimidine
  • C081320 8-(3-chlorostyryl)caffeine
  • D000241 Adenosine
  • C097270 ZM 241385
  • C506291 2-n-butyl-9-methyl-8-(1,2,3)triazol-2-yl-9H-purin-6-ylamine
  • C524699 5-(5-amino-3-(4-fluorophenyl)pyrazin-2-yl)-1-isopropylprydine-2(1H)-one
  • D000661 Amphetamine
  • D001564 Benzo(a)pyrene
          more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.84 RPKM in Liver
Total median expression: 9.24 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -318.80630-0.506 Picture PostScript Text
3' UTR -350.50868-0.404 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000276 - 7TM_GPCR_Rhodpsn
IPR001513 - Adeno_A2A_rcpt
IPR001634 - Adenosn_rcpt
IPR017452 - GPCR_Rhodpsn_supfam

Pfam Domains:
PF00001 - 7 transmembrane receptor (rhodopsin family)
PF10320 - Serpentine type 7TM GPCR chemoreceptor Srsx
PF13853 - Olfactory receptor

SCOP Domains:
81321 - Family A G protein-coupled receptor-like

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1MMH - Model 1UPE - Model 2YDO - X-ray 2YDV - X-ray 3EML - X-ray 3PWH - X-ray 3QAK - X-ray 3REY - X-ray 3RFM - X-ray 3UZA - X-ray 3UZC - X-ray 3VG9 - X-ray 3VGA - X-ray 4EIY - X-ray


ModBase Predicted Comparative 3D Structure on P29274
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
 Protein Sequence    
 Alignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0001609 G-protein coupled adenosine receptor activity
GO:0004871 signal transducer activity
GO:0004930 G-protein coupled receptor activity
GO:0005515 protein binding
GO:0019899 enzyme binding
GO:0031802 type 5 metabotropic glutamate receptor binding
GO:0042802 identical protein binding
GO:0046982 protein heterodimerization activity
GO:0051393 alpha-actinin binding

Biological Process:
GO:0001963 synaptic transmission, dopaminergic
GO:0001973 adenosine receptor signaling pathway
GO:0001975 response to amphetamine
GO:0006171 cAMP biosynthetic process
GO:0006355 regulation of transcription, DNA-templated
GO:0006469 negative regulation of protein kinase activity
GO:0006909 phagocytosis
GO:0006915 apoptotic process
GO:0006954 inflammatory response
GO:0006968 cellular defense response
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007188 adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007267 cell-cell signaling
GO:0007271 synaptic transmission, cholinergic
GO:0007417 central nervous system development
GO:0007596 blood coagulation
GO:0007600 sensory perception
GO:0007626 locomotory behavior
GO:0008015 blood circulation
GO:0008285 negative regulation of cell proliferation
GO:0014049 positive regulation of glutamate secretion
GO:0014057 positive regulation of acetylcholine secretion, neurotransmission
GO:0014061 regulation of norepinephrine secretion
GO:0031000 response to caffeine
GO:0032230 positive regulation of synaptic transmission, GABAergic
GO:0035249 synaptic transmission, glutamatergic
GO:0035810 positive regulation of urine volume
GO:0035815 positive regulation of renal sodium excretion
GO:0040013 negative regulation of locomotion
GO:0042311 vasodilation
GO:0042493 response to drug
GO:0042755 eating behavior
GO:0043116 negative regulation of vascular permeability
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043279 response to alkaloid
GO:0043524 negative regulation of neuron apoptotic process
GO:0044267 cellular protein metabolic process
GO:0045938 positive regulation of circadian sleep/wake cycle, sleep
GO:0046636 negative regulation of alpha-beta T cell activation
GO:0048143 astrocyte activation
GO:0048812 neuron projection morphogenesis
GO:0050714 positive regulation of protein secretion
GO:0050728 negative regulation of inflammatory response
GO:0051881 regulation of mitochondrial membrane potential
GO:0051899 membrane depolarization
GO:0051924 regulation of calcium ion transport
GO:0051968 positive regulation of synaptic transmission, glutamatergic
GO:0060079 excitatory postsynaptic potential
GO:0060080 inhibitory postsynaptic potential
GO:0060134 prepulse inhibition
GO:1900273 positive regulation of long-term synaptic potentiation
GO:2001235 positive regulation of apoptotic signaling pathway

Cellular Component:
GO:0005882 intermediate filament
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0012505 endomembrane system
GO:0014069 postsynaptic density
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030424 axon
GO:0030425 dendrite
GO:0030673 axolemma
GO:0032279 asymmetric synapse
GO:0042734 presynaptic membrane
GO:0043025 neuronal cell body
GO:0045211 postsynaptic membrane
GO:0048786 presynaptic active zone
GO:0099055 integral component of postsynaptic membrane
GO:0099056 integral component of presynaptic membrane


-  Descriptions from all associated GenBank mRNAs
  AB209022 - Homo sapiens mRNA for KIAA0376 protein variant protein.
X68486 - H.sapiens mRNA for A2a adenosine receptor.
EU036694 - Homo sapiens adenosine A2A receptor variant 8 mRNA, 5' UTR and partial cds, alternatively spliced.
AK123058 - Homo sapiens cDNA FLJ41063 fis, clone THYMU2013950, highly similar to ADENOSINE A2A RECEPTOR.
EU036693 - Homo sapiens adenosine A2A receptor variant 7 mRNA, 5' UTR and partial cds, alternatively spliced.
AK301420 - Homo sapiens cDNA FLJ61179 complete cds, highly similar to Adenosine A2a receptor.
BC013780 - Homo sapiens adenosine A2a receptor, mRNA (cDNA clone MGC:21342 IMAGE:4385637), complete cds.
EU036691 - Homo sapiens adenosine A2A receptor variant 5 mRNA, 5' UTR and partial cds, alternatively spliced.
EU036692 - Homo sapiens adenosine A2A receptor variant 6 mRNA, 5' UTR and partial cds, alternatively spliced.
AK289871 - Homo sapiens cDNA FLJ78315 complete cds, highly similar to Homo sapiens adenosine A2a receptor (ADORA2A), mRNA.
AK312946 - Homo sapiens cDNA, FLJ93400, Homo sapiens adenosine A2a receptor (ADORA2A), mRNA.
EU036689 - Homo sapiens adenosine A2A receptor variant 3 mRNA, 5' UTR and partial cds, alternatively spliced.
EU036690 - Homo sapiens adenosine A2A receptor variant 4 mRNA, 5' UTR and partial cds, alternatively spliced.
EU036687 - Homo sapiens adenosine A2A receptor variant 1 mRNA, 5' UTR and partial cds, alternatively spliced.
EU036688 - Homo sapiens adenosine A2A receptor variant 2 mRNA, 5' UTR and partial cds, alternatively spliced.
S46950 - adenosine A2 receptor [human, hippocampal, mRNA, 2572 nt].
JD453609 - Sequence 434633 from Patent EP1572962.
M97370 - Human adenosine receptor (A2) gene, complete cds.
JD279765 - Sequence 260789 from Patent EP1572962.
CR456367 - Homo sapiens ADORA2A full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.ADORA2A.V2).
JD425698 - Sequence 406722 from Patent EP1572962.
JD070938 - Sequence 51962 from Patent EP1572962.
JD195009 - Sequence 176033 from Patent EP1572962.
AB464450 - Synthetic construct DNA, clone: pF1KB8998, Homo sapiens ADORA2A gene for adenosine A2a receptor, without stop codon, in Flexi system.
CU013222 - Homo sapiens ADORA2A, mRNA (cDNA clone IMAGE:100000002), complete cds, without stop codon, in Gateway system.
CU012934 - Homo sapiens ADORA2A, mRNA (cDNA clone IMAGE:100000098), complete cds, with stop codon, in Gateway system.
CU680678 - Synthetic construct Homo sapiens gateway clone IMAGE:100019279 5' read ADORA2A mRNA.
KJ896388 - Synthetic construct Homo sapiens clone ccsbBroadEn_05782 ADORA2A gene, encodes complete protein.
KJ534761 - Homo sapiens clone ADORA2A_iso-A_adult-A01 adenosine A2a receptor isoform A (ADORA2A) mRNA, partial cds, alternatively spliced.
BT006999 - Homo sapiens adenosine A2a receptor mRNA, complete cds.
AY136747 - Homo sapiens adenosine receptor A2a (ADORA2A) mRNA, complete cds.
JD388522 - Sequence 369546 from Patent EP1572962.
JD247225 - Sequence 228249 from Patent EP1572962.
JD440623 - Sequence 421647 from Patent EP1572962.
JD045370 - Sequence 26394 from Patent EP1572962.
JD215892 - Sequence 196916 from Patent EP1572962.
JD540503 - Sequence 521527 from Patent EP1572962.
JD540504 - Sequence 521528 from Patent EP1572962.
JD165618 - Sequence 146642 from Patent EP1572962.
JD156034 - Sequence 137058 from Patent EP1572962.
JD547920 - Sequence 528944 from Patent EP1572962.
JD073135 - Sequence 54159 from Patent EP1572962.
JD159499 - Sequence 140523 from Patent EP1572962.
JD181128 - Sequence 162152 from Patent EP1572962.
JD070608 - Sequence 51632 from Patent EP1572962.
JD255072 - Sequence 236096 from Patent EP1572962.
JD071643 - Sequence 52667 from Patent EP1572962.
JD465577 - Sequence 446601 from Patent EP1572962.
JD375264 - Sequence 356288 from Patent EP1572962.
JD160692 - Sequence 141716 from Patent EP1572962.
JD317740 - Sequence 298764 from Patent EP1572962.
JD172551 - Sequence 153575 from Patent EP1572962.
JD310941 - Sequence 291965 from Patent EP1572962.
JD206626 - Sequence 187650 from Patent EP1572962.
JD384539 - Sequence 365563 from Patent EP1572962.
JD374005 - Sequence 355029 from Patent EP1572962.
JD275187 - Sequence 256211 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
hsa04020 - Calcium signaling pathway
hsa04080 - Neuroactive ligand-receptor interaction
hsa04270 - Vascular smooth muscle contraction

Reactome (by CSHL, EBI, and GO)

Protein P29274 (Reactome details) participates in the following event(s):

R-HSA-187661 TRKA activation by adenosine A2a receptor
R-HSA-418925 ADORA2A,B bind Ade-Rib
R-HSA-744886 The Ligand:GPCR:Gs complex dissociates
R-HSA-744887 Liganded Gs-activating GPCRs bind inactive heterotrimeric Gs
R-HSA-379044 Liganded Gs-activating GPCR acts as a GEF for Gs
R-HSA-187024 NGF-independant TRKA activation
R-HSA-187015 Activation of TRKA receptors
R-HSA-417973 Adenosine P1 receptors
R-HSA-5683826 Surfactant metabolism
R-HSA-187037 Signaling by NTRK1 (TRKA)
R-HSA-418555 G alpha (s) signalling events
R-HSA-418038 Nucleotide-like (purinergic) receptors
R-HSA-392499 Metabolism of proteins
R-HSA-166520 Signaling by NTRKs
R-HSA-388396 GPCR downstream signalling
R-HSA-373076 Class A/1 (Rhodopsin-like receptors)
R-HSA-9006934 Signaling by Receptor Tyrosine Kinases
R-HSA-372790 Signaling by GPCR
R-HSA-500792 GPCR ligand binding
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: AA2AR_HUMAN, ADORA2, AK289871, B2R7E0, NM_000675, NP_000666, P29274
UCSC ID: uc010gup.3
RefSeq Accession: NM_000675
Protein: P29274 (aka AA2AR_HUMAN or AA2A_HUMAN)
CCDS: CCDS13826.1

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: AK289871.1
exon count: 4CDS single in 3' UTR: no RNA size: 1963
ORF size: 1239CDS single in intron: no Alignment % ID: 99.90
txCdsPredict score: 2331.00frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.