Human Gene GTF3C4 (uc010mzw.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Genetic Association Studies of Complex Diseases and Disorders
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Genetic Association Database (archive): GTF3C4
CDC HuGE Published Literature: GTF3C4
Positive Disease Associations: Schizophrenia
Related Studies: - Schizophrenia
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[PubMed 0]
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Comparative Toxicogenomics Database (CTD)
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC060821 - Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone IMAGE:4825930), with apparent retained intron. AF142328 - Homo sapiens transcription factor IIIC90 mRNA, complete cds. JD429961 - Sequence 410985 from Patent EP1572962. JD556807 - Sequence 537831 from Patent EP1572962. BC094774 - Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone MGC:104675 IMAGE:4830453), complete cds. BC011619 - Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone IMAGE:3960260), partial cds. BC022787 - Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone IMAGE:3845225), partial cds. JD426382 - Sequence 407406 from Patent EP1572962. BC104755 - Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone MGC:132415 IMAGE:8143758), complete cds. BC112245 - Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa, mRNA (cDNA clone MGC:138450 IMAGE:8327713), complete cds. DQ583454 - Homo sapiens piRNA piR-50566, complete sequence. JD440460 - Sequence 421484 from Patent EP1572962. AB529214 - Synthetic construct DNA, clone: pF1KB0410, Homo sapiens GTF3C4 gene for general transcription factor IIIC, polypeptide 4, 90kDa, without stop codon, in Flexi system. KJ897996 - Synthetic construct Homo sapiens clone ccsbBroadEn_07390 GTF3C4 gene, encodes complete protein. AK024655 - Homo sapiens cDNA: FLJ21002 fis, clone CAE03545, highly similar to AF142328 Homo sapiens transcription factor IIIC90 mRNA. AK027509 - Homo sapiens cDNA FLJ14603 fis, clone NT2RP1000357, highly similar to General transcription factor 3C polypeptide 4 (EC 2.3.1.48). AK126436 - Homo sapiens cDNA FLJ44472 fis, clone UTERU2029742. JD170547 - Sequence 151571 from Patent EP1572962. JD203102 - Sequence 184126 from Patent EP1572962. AJ420451 - Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 909091. JD308665 - Sequence 289689 from Patent EP1572962. DQ581889 - Homo sapiens piRNA piR-50001, complete sequence. AF086460 - Homo sapiens full length insert cDNA clone ZD85A02.
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Biochemical and Signaling Pathways
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BioCarta from NCI Cancer Genome Anatomy Project h_RNApol3Pathway - RNA polymerase III transcription
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Other Names for This Gene
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Alternate Gene Symbols: BC060821 UCSC ID: uc010mzw.3 RefSeq Accession: NM_012204
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| BC060821.1
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exon count:
| 6 | CDS single in 3' UTR:
| no
| RNA size:
| 3579 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.97 |
txCdsPredict score:
| 4258.00 | frame shift in genome:
| no
| % Coverage:
| 91.03 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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