Human Gene CORIN (uc011bzf.2)
  Description: Homo sapiens corin, serine peptidase (CORIN), mRNA.
RefSeq Summary (NM_006587): This gene encodes a member of the type II transmembrane serine protease class of the trypsin superfamily. Members of this family are composed of multiple structurally distinct domains. The encoded protein converts pro-atrial natriuretic peptide to biologically active atrial natriuretic peptide, a cardiac hormone that regulates blood volume and pressure. This protein may also function as a pro-brain-type natriuretic peptide convertase. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2013].
Transcript (Including UTRs)
   Position: hg19 chr4:47,596,018-47,792,277 Size: 196,260 Total Exon Count: 21 Strand: -
Coding Region
   Position: hg19 chr4:47,597,738-47,765,595 Size: 167,858 Coding Exon Count: 19 

Page IndexSequence and LinksUniProtKB CommentsPrimersGenetic AssociationsMalaCards
CTDGene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther NamesModel Information
Methods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr4:47,596,018-47,792,277)mRNA (may differ from genome)Protein (903 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
GeneNetworkH-INVHGNCHPRDLynxMalacards
MGIneXtProtOMIMPubMedReactomeTreefam
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: CORIN_HUMAN
DESCRIPTION: RecName: Full=Atrial natriuretic peptide-converting enzyme; EC=3.4.21.-; AltName: Full=Corin; AltName: Full=Heart-specific serine proteinase ATC2; AltName: Full=Pro-ANP-converting enzyme; AltName: Full=Transmembrane protease serine 10; Contains: RecName: Full=Atrial natriuretic peptide-converting enzyme, N-terminal propeptide; Contains: RecName: Full=Atrial natriuretic peptide-converting enzyme, activated protease fragment; Contains: RecName: Full=Atrial natriuretic peptide-converting enzyme, 180 kDa soluble fragment; Contains: RecName: Full=Atrial natriuretic peptide-converting enzyme, 160 kDa soluble fragment; Contains: RecName: Full=Atrial natriuretic peptide-converting enzyme, 100 kDa soluble fragment;
FUNCTION: Serine-type endopeptidase involved in atrial natriuretic peptide hormone (NPPA) processing. Converts through proteolytic cleavage the non-functional propeptide NPPA into the active hormone, thereby regulating blood pressure in heart and promoting natriuresis, diuresis and vasodilation. Proteolytic cleavage of pro-NPPA also plays a role in female pregnancy by promoting trophoblast invasion and spiral artery remodeling in uterus. Also acts as a regulator of sodium reabsorption in kidney. May also process pro-NPPB the B-type natriuretic peptide.
FUNCTION: Isoform 2: has weaker endopeptidase activity compared to isoform 1.
ENZYME REGULATION: Inhibited in a dose-dependent manner by non- specific trypsin-like serine protease inhibitors including benzamidine.
BIOPHYSICOCHEMICAL PROPERTIES: Kinetic parameters: KM=1.28 mM for pyroGlu-Phe-Lys-pNA.HCl; KM=3.52 mM for pyroGlu-Pro-Arg-pNA.HCl; KM=2.95 mM for H-D-Pro-Phe-Arg-pNA.2HCl; KM=1.92 mM for Bz-Ile-Glu-(gamma-OR)-Gly-Arg-pNA.HCl; KM=16 mM for pyroGlu-Gly-Arg-pNA.HCl;
SUBCELLULAR LOCATION: Cell membrane; Single-pass type II membrane protein.
SUBCELLULAR LOCATION: Isoform 2: Cell membrane; Single-pass type II membrane protein. Note=Less efficiently targeted to the cell membrane compared to isoform 1.
SUBCELLULAR LOCATION: Atrial natriuretic peptide-converting enzyme, 180 kDa soluble fragment: Secreted. Note=Soluble form produced following cleavage by ADAM10.
SUBCELLULAR LOCATION: Atrial natriuretic peptide-converting enzyme, 160 kDa soluble fragment: Secreted. Note=Soluble form produced following autocatalytic cleavage.
SUBCELLULAR LOCATION: Atrial natriuretic peptide-converting enzyme, 100 kDa soluble fragment: Secreted. Note=Soluble form produced following autocatalytic cleavage.
TISSUE SPECIFICITY: Highly expressed in heart. Expressed in heart myocytes. Also expressed in pregnant uterus.
DOMAIN: The DDNN motif is required for targeting to the cell membrane and enzyme activation (PubMed:21518754).
PTM: N-glycosylated; required for processing and activation.
PTM: Activated through proteolytic processing by a trypsin-like protease; cleaved into a N-terminal propeptide and an activated corin protease fragment. Different soluble forms are produced by cleavage and autocatalytic cleavage: Atrial natriuretic peptide- converting enzyme, 180 kDa soluble fragment is produced by cleavage by ADAM10, while 160 kDa and 100 kDa soluble fragments are produced by autocatalytic cleavage. Cleavage by ADAM10 to produce soluble 180 kDa soluble fragment takes place after the transmembrane region and before FZ 1.
PTM: A disulfide bond links the activated corin protease fragment and the N-terminal propeptide. The disulfide bond also links the activated corin protease fragment with soluble fragments (100 kDa, 160 kDa and 180 kDa fragments).
DISEASE: Defects in CORIN are the cause of pre-eclampsia/eclampsia 5 (PEE5) [MIM:614595]; also known as gestational proteinuric hypertension. Preeclampsia is a pregnancy-associated disease with maternal symptoms but placental origin. Unlike most other human disorders, it impacts 2 individuals, the mother and her child, both of whom can be severely affected.
MISCELLANEOUS: Initially named CORIN due to its abundant expression in the heart (PubMed:10329693).
SIMILARITY: Belongs to the peptidase S1 family.
SIMILARITY: Contains 2 FZ (frizzled) domains.
SIMILARITY: Contains 7 LDL-receptor class A domains.
SIMILARITY: Contains 1 peptidase S1 domain.
SIMILARITY: Contains 1 SRCR domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): CORIN
CDC HuGE Published Literature: CORIN
Positive Disease Associations: Coronary Artery Disease , hypertension; blood pressure, arterial
Related Studies:
  1. Coronary Artery Disease
    , , . [PubMed 0]
  2. hypertension; blood pressure, arterial
    Dries, D. L. et al. 2005, Corin gene minor allele defined by 2 missense mutations is common in blacks and associated with high blood pressure and hypertension., Circulation. 2005 Oct;112(16):2403-10. [PubMed 16216958]
    The corin I555 (P568) allele is common in blacks and is associated with higher blood pressure and an increased risk for prevalent hypertension.

-  MalaCards Disease Associations
  MalaCards Gene Search: CORIN
Diseases sorted by gene-association score: preeclampsia/eclampsia 5* (1200), pre-eclampsia (15), systolic heart failure (13), preeclampsia/eclampsia 1* (12), eclampsia (12), deafness, autosomal recessive 24 (8), deafness, autosomal recessive 25 (7), total anomalous pulmonary venous return 1 (6)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 17.50 RPKM in Heart - Atrial Appendage
Total median expression: 45.33 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -66.90249-0.269 Picture PostScript Text
3' UTR -385.081720-0.224 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR020067 - Frizzled_dom
IPR023415 - LDLR_class-A_CS
IPR002172 - LDrepeatLR_classA_rpt
IPR009003 - Pept_cys/ser_Trypsin-like
IPR018114 - Peptidase_S1/S6_AS
IPR001254 - Peptidase_S1_S6
IPR017052 - Peptidase_S1A_corin
IPR017448 - Srcr_rcpt-rel

Pfam Domains:
PF00057 - Low-density lipoprotein receptor domain class A
PF00089 - Trypsin
PF01392 - Fz domain
PF13365 - Trypsin-like peptidase domain
PF15494 - Scavenger receptor cysteine-rich domain

SCOP Domains:
63501 - Frizzled cysteine-rich domain
50494 - Trypsin-like serine proteases
56487 - SRCR-like
57424 - LDL receptor-like module

ModBase Predicted Comparative 3D Structure on Q9Y5Q5
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene DetailsGene Details    
Gene SorterGene Sorter    
 RGD    
 Protein Sequence    
 Alignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004252 serine-type endopeptidase activity
GO:0008233 peptidase activity
GO:0008236 serine-type peptidase activity
GO:0016787 hydrolase activity

Biological Process:
GO:0003050 regulation of systemic arterial blood pressure by atrial natriuretic peptide
GO:0006508 proteolysis
GO:0007565 female pregnancy
GO:0008217 regulation of blood pressure
GO:0016486 peptide hormone processing
GO:0035813 regulation of renal sodium excretion
GO:1903779 regulation of cardiac conduction

Cellular Component:
GO:0005576 extracellular region
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0009986 cell surface
GO:0015629 actin cytoskeleton
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0016604 nuclear body


-  Descriptions from all associated GenBank mRNAs
  LP896327 - Sequence 1191 from Patent EP3253886.
AF133845 - Homo sapiens corin mRNA, complete cds.
BC110451 - Homo sapiens corin, serine peptidase, mRNA (cDNA clone MGC:119742 IMAGE:40027293), complete cds.
AK302816 - Homo sapiens cDNA FLJ59644 complete cds, highly similar to Atrial natriuteric peptide-converting enzyme(EC 3.4.21.-).
AK304038 - Homo sapiens cDNA FLJ50947 complete cds, highly similar to Atrial natriuteric peptide-converting enzyme(EC 3.4.21.-).
AK304466 - Homo sapiens cDNA FLJ57017 complete cds, highly similar to Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-).
AK297675 - Homo sapiens cDNA FLJ56535 complete cds, highly similar to Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-).
BX648285 - Homo sapiens mRNA; cDNA DKFZp686C11125 (from clone DKFZp686C11125).
JD087331 - Sequence 68355 from Patent EP1572962.
JD331550 - Sequence 312574 from Patent EP1572962.
JD306780 - Sequence 287804 from Patent EP1572962.
JD240545 - Sequence 221569 from Patent EP1572962.
JD552216 - Sequence 533240 from Patent EP1572962.
JD282369 - Sequence 263393 from Patent EP1572962.
JD501783 - Sequence 482807 from Patent EP1572962.
JD059788 - Sequence 40812 from Patent EP1572962.
JD320338 - Sequence 301362 from Patent EP1572962.
JD466923 - Sequence 447947 from Patent EP1572962.
JD037668 - Sequence 18692 from Patent EP1572962.
JD509197 - Sequence 490221 from Patent EP1572962.
AF113248 - Homo sapiens heart specific serine proteinase (ATC2) mRNA, partial cds.

-  Biochemical and Signaling Pathways
  BioCarta from NCI Cancer Genome Anatomy Project
h_gcrPathway - Corticosteroids and cardioprotection

Reactome (by CSHL, EBI, and GO)

Protein Q9Y5Q5 (Reactome details) participates in the following event(s):

R-HSA-5578783 CORIN(802-1042) hydrolyses NPPA to form NPPA(124-151)
R-HSA-5578768 Physiological factors
R-HSA-5576891 Cardiac conduction
R-HSA-397014 Muscle contraction

-  Other Names for This Gene
  Alternate Gene Symbols: AK302816, B0ZBE3, CORIN_HUMAN, CRN, NM_006587, NP_006578, Q2TBD2, Q4W5E5, Q4W5G6, Q9UHY2, Q9Y5Q5, TMPRSS10
UCSC ID: uc011bzf.2
RefSeq Accession: NM_006587
Protein: Q9Y5Q5 (aka CORIN_HUMAN)

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: AK302816.1
exon count: 21CDS single in 3' UTR: no RNA size: 3200
ORF size: 2712CDS single in intron: no Alignment % ID: 99.91
txCdsPredict score: 5328.50frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.