Human Gene FAM53C (uc011cyq.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC052993 - Homo sapiens family with sequence similarity 53, member C, mRNA (cDNA clone MGC:60317 IMAGE:5164799), complete cds. AK026729 - Homo sapiens cDNA: FLJ23076 fis, clone LNG05834. AK315567 - Homo sapiens cDNA, FLJ96639. AK310378 - Homo sapiens cDNA, FLJ17420. AK027412 - Homo sapiens cDNA FLJ14506 fis, clone NT2RM1000365. BC000259 - Homo sapiens family with sequence similarity 53, member C, mRNA (cDNA clone MGC:821 IMAGE:3357346), complete cds. AF251040 - Homo sapiens putative nuclear protein (STSG4523) mRNA, complete cds. JD406995 - Sequence 388019 from Patent EP1572962. JD174043 - Sequence 155067 from Patent EP1572962. JD200066 - Sequence 181090 from Patent EP1572962. JD424756 - Sequence 405780 from Patent EP1572962. CU674112 - Synthetic construct Homo sapiens gateway clone IMAGE:100018203 5' read FAM53C mRNA. HQ447931 - Synthetic construct Homo sapiens clone IMAGE:100071292; CCSB003394_03 family with sequence similarity 53, member C (FAM53C) gene, encodes complete protein. KJ893884 - Synthetic construct Homo sapiens clone ccsbBroadEn_03278 FAM53C gene, encodes complete protein. JD037419 - Sequence 18443 from Patent EP1572962. JD480321 - Sequence 461345 from Patent EP1572962. JD484714 - Sequence 465738 from Patent EP1572962. JD443736 - Sequence 424760 from Patent EP1572962. JD194323 - Sequence 175347 from Patent EP1572962. JD464073 - Sequence 445097 from Patent EP1572962. JD276409 - Sequence 257433 from Patent EP1572962. JD542149 - Sequence 523173 from Patent EP1572962. JD181243 - Sequence 162267 from Patent EP1572962. JD115373 - Sequence 96397 from Patent EP1572962. JD442234 - Sequence 423258 from Patent EP1572962. JD060166 - Sequence 41190 from Patent EP1572962. JD488699 - Sequence 469723 from Patent EP1572962. JD469022 - Sequence 450046 from Patent EP1572962. JD170288 - Sequence 151312 from Patent EP1572962. JD508700 - Sequence 489724 from Patent EP1572962. JD556543 - Sequence 537567 from Patent EP1572962. JD115860 - Sequence 96884 from Patent EP1572962. JD439916 - Sequence 420940 from Patent EP1572962. JD056051 - Sequence 37075 from Patent EP1572962. JD300000 - Sequence 281024 from Patent EP1572962. JD055643 - Sequence 36667 from Patent EP1572962. JD260970 - Sequence 241994 from Patent EP1572962. JD333804 - Sequence 314828 from Patent EP1572962. JD103316 - Sequence 84340 from Patent EP1572962. JD067895 - Sequence 48919 from Patent EP1572962. JD424479 - Sequence 405503 from Patent EP1572962. JD565322 - Sequence 546346 from Patent EP1572962. JD420841 - Sequence 401865 from Patent EP1572962. JD045214 - Sequence 26238 from Patent EP1572962. JD372025 - Sequence 353049 from Patent EP1572962. JD155018 - Sequence 136042 from Patent EP1572962. JD377399 - Sequence 358423 from Patent EP1572962. JD355389 - Sequence 336413 from Patent EP1572962. JD188483 - Sequence 169507 from Patent EP1572962. JD221182 - Sequence 202206 from Patent EP1572962. JD438779 - Sequence 419803 from Patent EP1572962. JD103746 - Sequence 84770 from Patent EP1572962. JD244153 - Sequence 225177 from Patent EP1572962. JD210788 - Sequence 191812 from Patent EP1572962. JD022042 - Sequence 3066 from Patent EP1572962. JD150388 - Sequence 131412 from Patent EP1572962. JD347887 - Sequence 328911 from Patent EP1572962. JD029902 - Sequence 10926 from Patent EP1572962. JD047439 - Sequence 28463 from Patent EP1572962. JD352317 - Sequence 333341 from Patent EP1572962. JD288624 - Sequence 269648 from Patent EP1572962. JD250420 - Sequence 231444 from Patent EP1572962. JD221951 - Sequence 202975 from Patent EP1572962. JD426182 - Sequence 407206 from Patent EP1572962. JD356133 - Sequence 337157 from Patent EP1572962. JD422593 - Sequence 403617 from Patent EP1572962. JD235559 - Sequence 216583 from Patent EP1572962. JD228025 - Sequence 209049 from Patent EP1572962. JD061036 - Sequence 42060 from Patent EP1572962. JD236694 - Sequence 217718 from Patent EP1572962. JD507756 - Sequence 488780 from Patent EP1572962. JD279934 - Sequence 260958 from Patent EP1572962. JD381883 - Sequence 362907 from Patent EP1572962. JD315746 - Sequence 296770 from Patent EP1572962. JD467478 - Sequence 448502 from Patent EP1572962. JD280858 - Sequence 261882 from Patent EP1572962. JD466825 - Sequence 447849 from Patent EP1572962. JD266600 - Sequence 247624 from Patent EP1572962. JD344598 - Sequence 325622 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: AK310378 UCSC ID: uc011cyq.2 RefSeq Accession: NM_016605
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| no
| RNA accession:
| AK310378.1
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exon count:
| 5 | CDS single in 3' UTR:
| no
| RNA size:
| 923 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 584.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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