Human Gene TACC1 (uc011lcd.2)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Genetic Association Studies of Complex Diseases and Disorders
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Genetic Association Database (archive): TACC1
CDC HuGE Published Literature: TACC1
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MalaCards Disease Associations
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Comparative Toxicogenomics Database (CTD)
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BX647696 - Homo sapiens mRNA; cDNA DKFZp686K18126 (from clone DKFZp686K18126). AY072873 - Homo sapiens transforming, acidic coiled-coil containing protein 1 variant TACC1-B (TACC1) mRNA, partial cds; alternatively spliced. AY072876 - Homo sapiens transforming, acidic coiled-coil containing protein 1 variant TACC1-E (TACC1) mRNA, partial cds; alternatively spliced. AK304774 - Homo sapiens cDNA FLJ52058 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. AK295071 - Homo sapiens cDNA FLJ50409 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. AK303596 - Homo sapiens cDNA FLJ52382 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. AK304507 - Homo sapiens cDNA FLJ56209 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. BC041391 - Homo sapiens transforming, acidic coiled-coil containing protein 1, mRNA (cDNA clone MGC:43967 IMAGE:5276767), complete cds. JF432777 - Synthetic construct Homo sapiens clone IMAGE:100074021 transforming, acidic coiled-coil containing protein 1 (TACC1) gene, encodes complete protein. KJ901774 - Synthetic construct Homo sapiens clone ccsbBroadEn_11168 TACC1 gene, encodes complete protein. AY072874 - Homo sapiens transforming, acidic coiled-coil containing protein 1 variant TACC1-C (TACC1) mRNA, partial cds; alternatively spliced. AY072875 - Homo sapiens transforming, acidic coiled-coil containing protein 1 variant TACC1-D (TACC1) mRNA, partial cds; alternatively spliced. AK308849 - Homo sapiens cDNA, FLJ98890. AK314620 - Homo sapiens cDNA, FLJ95461, highly similar to Homo sapiens transforming, acidic coiled-coil containing protein 1 (TACC1), mRNA. AF049910 - Homo sapiens TACC1 (TACC1) mRNA, complete cds. AY177411 - Homo sapiens transforming acidic coiled-coil containing protein 1 short isoform (TACC1) mRNA, complete cds. AB463317 - Synthetic construct DNA, clone: pF1KB9572, Homo sapiens TACC1 gene for transforming, acidic coiled-coil containing protein 1, without stop codon, in Flexi system. AK294931 - Homo sapiens cDNA FLJ50512 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. AK295841 - Homo sapiens cDNA FLJ50411 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. AB029026 - Homo sapiens mRNA for KIAA1103 protein, partial cds. AK304725 - Homo sapiens cDNA FLJ52297 complete cds, highly similar to Transforming acidic coiled-coil-containing protein 1. AY039239 - Homo sapiens gastric cancer antigen Ga55 (TACC1) mRNA, partial cds. AY139007 - Homo sapiens TACC1-like protein mRNA, complete cds. AK098223 - Homo sapiens cDNA FLJ40904 fis, clone UTERU2004564. JD269219 - Sequence 250243 from Patent EP1572962. JD518997 - Sequence 500021 from Patent EP1572962. JD232862 - Sequence 213886 from Patent EP1572962. JD460356 - Sequence 441380 from Patent EP1572962. JD562431 - Sequence 543455 from Patent EP1572962. JD090700 - Sequence 71724 from Patent EP1572962. JD432693 - Sequence 413717 from Patent EP1572962. JD097217 - Sequence 78241 from Patent EP1572962. JD366946 - Sequence 347970 from Patent EP1572962. JD488925 - Sequence 469949 from Patent EP1572962. JD215340 - Sequence 196364 from Patent EP1572962. JD066446 - Sequence 47470 from Patent EP1572962. JD299305 - Sequence 280329 from Patent EP1572962. JD111988 - Sequence 93012 from Patent EP1572962. JD498058 - Sequence 479082 from Patent EP1572962. JD564664 - Sequence 545688 from Patent EP1572962. JD416178 - Sequence 397202 from Patent EP1572962. JD082630 - Sequence 63654 from Patent EP1572962. JD061437 - Sequence 42461 from Patent EP1572962. JD451221 - Sequence 432245 from Patent EP1572962. JD376142 - Sequence 357166 from Patent EP1572962. JD376143 - Sequence 357167 from Patent EP1572962. JD498039 - Sequence 479063 from Patent EP1572962. JD276461 - Sequence 257485 from Patent EP1572962. JD553521 - Sequence 534545 from Patent EP1572962. JD431286 - Sequence 412310 from Patent EP1572962. JD564036 - Sequence 545060 from Patent EP1572962. JD557159 - Sequence 538183 from Patent EP1572962. JD088620 - Sequence 69644 from Patent EP1572962. JD267398 - Sequence 248422 from Patent EP1572962. JD447678 - Sequence 428702 from Patent EP1572962. JD085109 - Sequence 66133 from Patent EP1572962. JD249564 - Sequence 230588 from Patent EP1572962. JD378010 - Sequence 359034 from Patent EP1572962. JD354049 - Sequence 335073 from Patent EP1572962. JD269657 - Sequence 250681 from Patent EP1572962. JD189797 - Sequence 170821 from Patent EP1572962. JD251491 - Sequence 232515 from Patent EP1572962. JD036424 - Sequence 17448 from Patent EP1572962. JD036748 - Sequence 17772 from Patent EP1572962. JD433674 - Sequence 414698 from Patent EP1572962. JD234837 - Sequence 215861 from Patent EP1572962. JD483720 - Sequence 464744 from Patent EP1572962. JD048828 - Sequence 29852 from Patent EP1572962. JD369324 - Sequence 350348 from Patent EP1572962. JD300223 - Sequence 281247 from Patent EP1572962. JD314705 - Sequence 295729 from Patent EP1572962. DQ601424 - Homo sapiens piRNA piR-39490, complete sequence. JD170964 - Sequence 151988 from Patent EP1572962. JD554021 - Sequence 535045 from Patent EP1572962. JD516773 - Sequence 497797 from Patent EP1572962. JD313559 - Sequence 294583 from Patent EP1572962. JD343373 - Sequence 324397 from Patent EP1572962. JD378971 - Sequence 359995 from Patent EP1572962. JD389673 - Sequence 370697 from Patent EP1572962. JD292900 - Sequence 273924 from Patent EP1572962. JD061641 - Sequence 42665 from Patent EP1572962. JD466145 - Sequence 447169 from Patent EP1572962. JD281080 - Sequence 262104 from Patent EP1572962. JD209510 - Sequence 190534 from Patent EP1572962. JD333433 - Sequence 314457 from Patent EP1572962. JD182987 - Sequence 164011 from Patent EP1572962. JD093916 - Sequence 74940 from Patent EP1572962. AF075051 - Homo sapiens full length insert cDNA YN99C01. JD355069 - Sequence 336093 from Patent EP1572962. JD552697 - Sequence 533721 from Patent EP1572962. JD363699 - Sequence 344723 from Patent EP1572962. JD368311 - Sequence 349335 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: AK304725 UCSC ID: uc011lcd.2 RefSeq Accession: NM_001146216
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| AK304725.1
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exon count:
| 10 | CDS single in 3' UTR:
| no
| RNA size:
| 1549 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.94 |
txCdsPredict score:
| 1322.50 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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