The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on B4E0G2
Front
Top
Side
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
BC006333 - Homo sapiens tripartite motif-containing 14, mRNA (cDNA clone MGC:12564 IMAGE:4299815), complete cds. LF385385 - JP 2014500723-A/192888: Polycomb-Associated Non-Coding RNAs. AK097480 - Homo sapiens cDNA FLJ40161 fis, clone TESTI2015710. AF220130 - Homo sapiens tripartite motif protein TRIM14 alpha (TRIM14) mRNA, complete cds; alternatively spliced. AF220131 - Homo sapiens tripartite motif protein TRIM14 beta (TRIM14) mRNA, complete cds; alternatively spliced. D50919 - Homo sapiens mRNA for KIAA0129 gene, complete cds. JD047031 - Sequence 28055 from Patent EP1572962. JD143743 - Sequence 124767 from Patent EP1572962. JD059468 - Sequence 40492 from Patent EP1572962. JD499165 - Sequence 480189 from Patent EP1572962. DQ575048 - Homo sapiens piRNA piR-43160, complete sequence. JD303610 - Sequence 284634 from Patent EP1572962. JD149434 - Sequence 130458 from Patent EP1572962. JD366580 - Sequence 347604 from Patent EP1572962. JD185395 - Sequence 166419 from Patent EP1572962. JD105980 - Sequence 87004 from Patent EP1572962. JD517762 - Sequence 498786 from Patent EP1572962. JD105979 - Sequence 87003 from Patent EP1572962. JD364568 - Sequence 345592 from Patent EP1572962. JD451517 - Sequence 432541 from Patent EP1572962. JD534423 - Sequence 515447 from Patent EP1572962. JD185394 - Sequence 166418 from Patent EP1572962. JD292392 - Sequence 273416 from Patent EP1572962. JD175460 - Sequence 156484 from Patent EP1572962. JD472346 - Sequence 453370 from Patent EP1572962. JD481559 - Sequence 462583 from Patent EP1572962. JD421389 - Sequence 402413 from Patent EP1572962. JD199404 - Sequence 180428 from Patent EP1572962. JD301871 - Sequence 282895 from Patent EP1572962. DQ580636 - Homo sapiens piRNA piR-48748, complete sequence. JD467234 - Sequence 448258 from Patent EP1572962. DQ598157 - Homo sapiens piRNA piR-36223, complete sequence. DQ598156 - Homo sapiens piRNA piR-36222, complete sequence. JD346309 - Sequence 327333 from Patent EP1572962. DQ573670 - Homo sapiens piRNA piR-41782, complete sequence. JD323701 - Sequence 304725 from Patent EP1572962. JD431292 - Sequence 412316 from Patent EP1572962. JD546479 - Sequence 527503 from Patent EP1572962. JD228813 - Sequence 209837 from Patent EP1572962. DQ592537 - Homo sapiens piRNA piR-59649, complete sequence. DQ600591 - Homo sapiens piRNA piR-38657, complete sequence. DQ574716 - Homo sapiens piRNA piR-42828, complete sequence. JD527028 - Sequence 508052 from Patent EP1572962. JD080457 - Sequence 61481 from Patent EP1572962. JD206203 - Sequence 187227 from Patent EP1572962. JD381142 - Sequence 362166 from Patent EP1572962. DQ573519 - Homo sapiens piRNA piR-41631, complete sequence. JD248993 - Sequence 230017 from Patent EP1572962. JD037320 - Sequence 18344 from Patent EP1572962. JD137842 - Sequence 118866 from Patent EP1572962. JD263912 - Sequence 244936 from Patent EP1572962. JD296246 - Sequence 277270 from Patent EP1572962. JD236989 - Sequence 218013 from Patent EP1572962. JD441032 - Sequence 422056 from Patent EP1572962. JD089875 - Sequence 70899 from Patent EP1572962. DQ592709 - Homo sapiens piRNA piR-59821, complete sequence. JD302992 - Sequence 284016 from Patent EP1572962. DQ596178 - Homo sapiens piRNA piR-34244, complete sequence. DQ590364 - Homo sapiens piRNA piR-57476, complete sequence. DQ592139 - Homo sapiens piRNA piR-59251, complete sequence. JD323502 - Sequence 304526 from Patent EP1572962. DQ574549 - Homo sapiens piRNA piR-42661, complete sequence. DQ596856 - Homo sapiens piRNA piR-34922, complete sequence. DQ599276 - Homo sapiens piRNA piR-37342, complete sequence. JD302404 - Sequence 283428 from Patent EP1572962. JD387317 - Sequence 368341 from Patent EP1572962. JD462986 - Sequence 444010 from Patent EP1572962. JD181341 - Sequence 162365 from Patent EP1572962. JD230574 - Sequence 211598 from Patent EP1572962. JD126974 - Sequence 107998 from Patent EP1572962. JD200142 - Sequence 181166 from Patent EP1572962. JD132165 - Sequence 113189 from Patent EP1572962. DQ600931 - Homo sapiens piRNA piR-38997, complete sequence. DQ592891 - Homo sapiens piRNA piR-60003, complete sequence. DQ601333 - Homo sapiens piRNA piR-39399, complete sequence. DQ597206 - Homo sapiens piRNA piR-35272, complete sequence. DQ573141 - Homo sapiens piRNA piR-41253, complete sequence. DQ573140 - Homo sapiens piRNA piR-41252, complete sequence. DQ599744 - Homo sapiens piRNA piR-37810, complete sequence. AK316464 - Homo sapiens cDNA, FLJ79363 complete cds, highly similar to Tripartite motif-containing protein 14. AK055833 - Homo sapiens cDNA FLJ31271 fis, clone KIDNE2006149, weakly similar to Xenopus laevis RING finger protein mRNA. JD525394 - Sequence 506418 from Patent EP1572962. DQ583228 - Homo sapiens piRNA piR-50340, complete sequence. JD126922 - Sequence 107946 from Patent EP1572962. JD371517 - Sequence 352541 from Patent EP1572962. DQ594171 - Homo sapiens piRNA piR-60283, complete sequence. AK303366 - Homo sapiens cDNA FLJ55267 complete cds, highly similar to Tripartite motif-containing protein 14. DQ594501 - Homo sapiens piRNA piR-60613, complete sequence. JD430692 - Sequence 411716 from Patent EP1572962. JD394167 - Sequence 375191 from Patent EP1572962. JD161935 - Sequence 142959 from Patent EP1572962. JD133954 - Sequence 114978 from Patent EP1572962. DQ574742 - Homo sapiens piRNA piR-42854, complete sequence. DQ597010 - Homo sapiens piRNA piR-35076, complete sequence. DQ597009 - Homo sapiens piRNA piR-35075, complete sequence. DQ597011 - Homo sapiens piRNA piR-35077, complete sequence. DQ572901 - Homo sapiens piRNA piR-41013, complete sequence. DQ597008 - Homo sapiens piRNA piR-35074, complete sequence. JD468167 - Sequence 449191 from Patent EP1572962. JD417267 - Sequence 398291 from Patent EP1572962. JD435097 - Sequence 416121 from Patent EP1572962. JD128464 - Sequence 109488 from Patent EP1572962. JD520293 - Sequence 501317 from Patent EP1572962. JD248129 - Sequence 229153 from Patent EP1572962. JD392077 - Sequence 373101 from Patent EP1572962. JD107174 - Sequence 88198 from Patent EP1572962. AK292825 - Homo sapiens cDNA FLJ75477 complete cds, highly similar to Homo sapiens tripartite motif-containing 14 (TRIM14), transcript variant 3, mRNA. DQ596304 - Homo sapiens piRNA piR-34370, complete sequence. JD048057 - Sequence 29081 from Patent EP1572962. JD224570 - Sequence 205594 from Patent EP1572962. JD460099 - Sequence 441123 from Patent EP1572962. DQ893293 - Synthetic construct clone IMAGE:100005923; FLH196222.01X; RZPDo839F11154D tripartite motif-containing 14 (TRIM14) gene, encodes complete protein. DQ896623 - Synthetic construct Homo sapiens clone IMAGE:100011083; FLH196218.01L; RZPDo839F11153D tripartite motif-containing 14 (TRIM14) gene, encodes complete protein. AB529155 - Synthetic construct DNA, clone: pF1KA0129, Homo sapiens TRIM14 gene for tripartite motif-containing protein 14, without stop codon, in Flexi system. MA620962 - JP 2018138019-A/192888: Polycomb-Associated Non-Coding RNAs.