Human Gene SREK1IP1 (uc021xzh.1)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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AL832348 - Homo sapiens mRNA; cDNA DKFZp451A086 (from clone DKFZp451A086). AK094073 - Homo sapiens cDNA FLJ36754 fis, clone UTERU2018127. AX748442 - Sequence 1967 from Patent EP1308459. BC127085 - Homo sapiens SFRS12-interacting protein 1, mRNA (cDNA clone MGC:150548 IMAGE:40122236), complete cds. BC127086 - Homo sapiens SFRS12-interacting protein 1, mRNA (cDNA clone MGC:150549 IMAGE:40122239), complete cds. BC108716 - Homo sapiens SFRS12-interacting protein 1, mRNA (cDNA clone MGC:131910 IMAGE:6184559), complete cds. BC047006 - Homo sapiens cDNA clone IMAGE:4429121. HM370403 - Homo sapiens SFRS12-interacting protein 1 (SFRS12IP1) mRNA, 5' UTR, alternatively spliced. JD133357 - Sequence 114381 from Patent EP1572962. JD433200 - Sequence 414224 from Patent EP1572962. JD549922 - Sequence 530946 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: HM370403 UCSC ID: uc021xzh.1 RefSeq Accession: NM_173829
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| no
| RNA accession:
| HM370403.1
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exon count:
| 2 | CDS single in 3' UTR:
| no
| RNA size:
| 266 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 99.62 |
txCdsPredict score:
| 344.00 | frame shift in genome:
| no
| % Coverage:
| 99.62 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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