Human Gene MFN2 (ENST00000235329.10) from GENCODE V44
  Description: Homo sapiens mitofusin 2 (MFN2), transcript variant 1, mRNA. (from RefSeq NM_014874)
RefSeq Summary (NM_014874): This gene encodes a mitochondrial membrane protein that participates in mitochondrial fusion and contributes to the maintenance and operation of the mitochondrial network. This protein is involved in the regulation of vascular smooth muscle cell proliferation, and it may play a role in the pathophysiology of obesity. Mutations in this gene cause Charcot-Marie-Tooth disease type 2A2, and hereditary motor and sensory neuropathy VI, which are both disorders of the peripheral nervous system. Defects in this gene have also been associated with early-onset stroke. Two transcript variants encoding the same protein have been identified. [provided by RefSeq, Jul 2008].
Gencode Transcript: ENST00000235329.10
Gencode Gene: ENSG00000116688.18
Transcript (Including UTRs)
   Position: hg38 chr1:11,980,444-12,013,508 Size: 33,065 Total Exon Count: 19 Strand: +
Coding Region
   Position: hg38 chr1:11,989,169-12,011,565 Size: 22,397 Coding Exon Count: 17 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesGeneReviewsMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:11,980,444-12,013,508)mRNA (may differ from genome)Protein (757 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGencodeGeneCards
HGNCHPRDLynxMalacardsMGIneXtProt
OMIMPubMedReactomeUniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: MFN2_HUMAN
DESCRIPTION: RecName: Full=Mitofusin-2; EC=3.6.5.-; AltName: Full=Transmembrane GTPase MFN2;
FUNCTION: Essential transmembrane GTPase, which mediates mitochondrial fusion. Fusion of mitochondria occurs in many cell types and constitutes an important step in mitochondria morphology, which is balanced between fusion and fission. MFN2 acts independently of the cytoskeleton. It therefore plays a central role in mitochondrial metabolism and may be associated with obesity and/or apoptosis processes. Overexpression induces the formation of mitochondrial networks. Plays an important role in the regulation of vascular smooth muscle cell proliferation.
CATALYTIC ACTIVITY: GTP + H(2)O = GDP + phosphate.
SUBUNIT: Forms homomultimers and heteromultimers with MFN1. Oligomerization, which is mediated by the second coiled coil region, may play an essential role in mitochondrion fusion. Interacts with VAT1 (By similarity).
SUBCELLULAR LOCATION: Mitochondrion outer membrane; Multi-pass membrane protein. Note=Colocalizes with BAX during apoptosis.
TISSUE SPECIFICITY: Ubiquitous; expressed at low level. Highly expressed in heart and kidney.
DISEASE: Defects in MFN2 are the cause of Charcot-Marie-Tooth disease type 2A2 (CMT2A2) [MIM:609260]. CMT2A2 is a form of Charcot-Marie-Tooth disease, the most common inherited disorder of the peripheral nervous system. Charcot-Marie-Tooth disease is classified in two main groups on the basis of electrophysiologic properties and histopathology: primary peripheral demyelinating neuropathy or CMT1, and primary peripheral axonal neuropathy or CMT2. Neuropathies of the CMT2 group are characterized by signs of axonal regeneration in the absence of obvious myelin alterations, normal or slightly reduced nerve conduction velocities, and progressive distal muscle weakness and atrophy.
DISEASE: Defects in MFN2 are the cause of Charcot-Marie-Tooth disease type 6 (CMT6) [MIM:601152]; also referred to as autosomal dominant hereditary motor and sensory neuropathy VI (HMSN6). CMT6 is an autosomal dominant form of axonal CMT associated with optic atrophy.
SIMILARITY: Belongs to the mitofusin family.
SEQUENCE CAUTION: Sequence=BAA34389.2; Type=Erroneous initiation; Sequence=CAB70866.2; Type=Frameshift; Positions=581;
WEB RESOURCE: Name=Inherited peripheral neuropathies mutation db; URL="http://www.molgen.ua.ac.be/CMTMutations/";
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/MFN2";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MFN2
Diseases sorted by gene-association score: hereditary motor and sensory neuropathy via* (1671), charcot-marie-tooth disease, axonal, type 2a2a* (1650), charcot-marie-tooth disease, axonal, type 2a2b* (1200), lipomatosis, multiple symmetric* (364), hereditary motor and sensory neuropathy v* (350), severe early-onset axonal neuropathy due to mfn2 deficiency* (350), charcot-marie-tooth disease, axonal, type 2s* (293), charcot-marie-tooth disease* (274), charcot-marie-tooth neuropathy type 2a* (219), charcot-marie-tooth disease, type 2e* (212), roussy-levy syndrome* (179), beckwith-wiedemann syndrome* (151), microcephaly* (121), charcot-marie-tooth disease type 2a2 (27), neuropathy (21), tooth disease (21), optic atrophy 1 (15), optic atrophy plus syndrome (13), charcot-marie-tooth disease, type 2a1 (12), charcot-marie-tooth disease type 2a (11), multiple symmetrical lipomatosis (10), axonal neuropathy (9), sensory peripheral neuropathy (9), lipomatosis (7), hereditary neuropathies (6), neuropathy, recurrent, with pressure palsies (6), cranial nerve disease (6), epidermolysis bullosa simplex with muscular dystrophy (6), motor peripheral neuropathy (5), spastic paraplegia 7, autosomal recessive (5), obesity (5), charcot-marie-tooth disease, type 1e (5), peripheral nervous system disease (5), optic nerve disease (5), hereditary motor and sensory neuropathy, type iic (4), charcot-marie-tooth disease, type 4d (4), neuropathy, congenital hypomyelinating (4), charcot-marie-tooth disease, axonal, type 2k (4)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 125.89 RPKM in Heart - Left Ventricle
Total median expression: 1747.97 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -55.00190-0.289 Picture PostScript Text
3' UTR -714.501943-0.368 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001401 - Dynamin_GTPase
IPR006884 - Fzo/mitofusin_HR2

Pfam Domains:
PF00350 - Dynamin family
PF04799 - fzo-like conserved region

ModBase Predicted Comparative 3D Structure on O95140
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0016787 hydrolase activity
GO:0031625 ubiquitin protein ligase binding

Biological Process:
GO:0001825 blastocyst formation
GO:0006626 protein targeting to mitochondrion
GO:0006914 autophagy
GO:0006915 apoptotic process
GO:0006986 response to unfolded protein
GO:0007006 mitochondrial membrane organization
GO:0007596 blood coagulation
GO:0008053 mitochondrial fusion
GO:0016236 macroautophagy
GO:0034497 protein localization to pre-autophagosomal structure
GO:0046580 negative regulation of Ras protein signal transduction
GO:0048593 camera-type eye morphogenesis
GO:0048662 negative regulation of smooth muscle cell proliferation
GO:0051646 mitochondrion localization
GO:0061734 parkin-mediated mitophagy in response to mitochondrial depolarization
GO:1904707 positive regulation of vascular smooth muscle cell proliferation
GO:1905461 positive regulation of vascular associated smooth muscle cell apoptotic process
GO:0007050 cell cycle arrest

Cellular Component:
GO:0005739 mitochondrion
GO:0005741 mitochondrial outer membrane
GO:0005829 cytosol
GO:0015630 microtubule cytoskeleton
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0031306 intrinsic component of mitochondrial outer membrane


-  Descriptions from all associated GenBank mRNAs
  AK289828 - Homo sapiens cDNA FLJ78432 complete cds, highly similar to Homo sapiens mitofusin 2 (MFN2), mRNA.
AF036536 - Homo sapiens CPRP1 mRNA, complete cds.
D86987 - Homo sapiens KIAA0214 mRNA for KIAA0214 protein.
AK021947 - Homo sapiens cDNA FLJ11885 fis, clone HEMBA1007203, highly similar to Transmembrane GTPase MFN2 (EC 3.6.5.-).
AK295890 - Homo sapiens cDNA FLJ57997 complete cds, highly similar to Transmembrane GTPase MFN2 (EC 3.6.5.-).
BC017061 - Homo sapiens mitofusin 2, mRNA (cDNA clone MGC:9514 IMAGE:3901235), complete cds.
AY028429 - Homo sapiens mitochondrial assembly regulatory factor mRNA, complete cds; nuclear gene for mitochondrial product.
DQ894181 - Synthetic construct Homo sapiens clone IMAGE:100008641; FLH168424.01L; RZPDo839G0991D mitofusin 2 (MFN2) gene, encodes complete protein.
AB383803 - Synthetic construct DNA, clone: pF1KSDA0214, Homo sapiens MFN2 gene for mitofusin-2, complete cds, without stop codon, in Flexi system.
EU176270 - Synthetic construct Homo sapiens clone IMAGE:100006360; FLH168429.01X; RZPDo839E11250D mitofusin 2 (MFN2) gene, encodes complete protein.
AK022453 - Homo sapiens cDNA FLJ12391 fis, clone MAMMA1002684, highly similar to Transmembrane GTPase MFN2 (EC 3.6.5.-).
AK001189 - Homo sapiens cDNA FLJ10327 fis, clone NT2RM2000581, highly similar to Transmembrane GTPase MFN2 (EC 3.6.5.-).
AL137666 - Homo sapiens mRNA; cDNA DKFZp434P237 (from clone DKFZp434P237).
JD387220 - Sequence 368244 from Patent EP1572962.
JD277742 - Sequence 258766 from Patent EP1572962.
JD322471 - Sequence 303495 from Patent EP1572962.
AL122114 - Homo sapiens mRNA; cDNA DKFZp434K0221 (from clone DKFZp434K0221).
JD253236 - Sequence 234260 from Patent EP1572962.
JD293846 - Sequence 274870 from Patent EP1572962.
JD373478 - Sequence 354502 from Patent EP1572962.
JD341213 - Sequence 322237 from Patent EP1572962.
JD063741 - Sequence 44765 from Patent EP1572962.
JD365628 - Sequence 346652 from Patent EP1572962.
JD402432 - Sequence 383456 from Patent EP1572962.
JD099768 - Sequence 80792 from Patent EP1572962.
JD382938 - Sequence 363962 from Patent EP1572962.
JD181583 - Sequence 162607 from Patent EP1572962.
JD081859 - Sequence 62883 from Patent EP1572962.
JD493623 - Sequence 474647 from Patent EP1572962.
JD543082 - Sequence 524106 from Patent EP1572962.
JD223366 - Sequence 204390 from Patent EP1572962.
JD533352 - Sequence 514376 from Patent EP1572962.
JD421687 - Sequence 402711 from Patent EP1572962.
JD475909 - Sequence 456933 from Patent EP1572962.
JD231648 - Sequence 212672 from Patent EP1572962.
JD207228 - Sequence 188252 from Patent EP1572962.
JD076988 - Sequence 58012 from Patent EP1572962.
JD207420 - Sequence 188444 from Patent EP1572962.
JD356098 - Sequence 337122 from Patent EP1572962.
JD475362 - Sequence 456386 from Patent EP1572962.
JD049697 - Sequence 30721 from Patent EP1572962.
JD132911 - Sequence 113935 from Patent EP1572962.
JD492762 - Sequence 473786 from Patent EP1572962.
JD301170 - Sequence 282194 from Patent EP1572962.
JD344332 - Sequence 325356 from Patent EP1572962.
JD215300 - Sequence 196324 from Patent EP1572962.
JD054145 - Sequence 35169 from Patent EP1572962.
JD102495 - Sequence 83519 from Patent EP1572962.
JD262660 - Sequence 243684 from Patent EP1572962.
JD207973 - Sequence 188997 from Patent EP1572962.
JD209967 - Sequence 190991 from Patent EP1572962.
JD326361 - Sequence 307385 from Patent EP1572962.
JD434115 - Sequence 415139 from Patent EP1572962.
JD091208 - Sequence 72232 from Patent EP1572962.
JD291898 - Sequence 272922 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein O95140 (Reactome details) participates in the following event(s):

R-HSA-5205682 Parkin promotes the ubiquitination of mitochondrial substrates
R-HSA-5205673 p62 binds ubiquitinated mitochondrial substrates
R-HSA-992703 Mitofusins trans-interact linking mitochondria prior to fusion
R-HSA-5205649 p62 links damaged mitochondria to LC3
R-HSA-5205663 LC3 binds the autophagosome membrane Atg5-Atg12 complex
R-HSA-5205685 Pink/Parkin Mediated Mitophagy
R-HSA-983231 Factors involved in megakaryocyte development and platelet production
R-HSA-5205647 Mitophagy
R-HSA-109582 Hemostasis

-  Other Names for This Gene
  Alternate Gene Symbols: A8K1B3, CPRP1, ENST00000235329.1, ENST00000235329.2, ENST00000235329.3, ENST00000235329.4, ENST00000235329.5, ENST00000235329.6, ENST00000235329.7, ENST00000235329.8, ENST00000235329.9, KIAA0214, MFN2_HUMAN, NM_014874, O95140, O95572, Q5JXC3, Q5JXC4, Q9H131, Q9NSX8, uc001atn.1, uc001atn.2, uc001atn.3, uc001atn.4, uc001atn.5, uc001atn.6
UCSC ID: ENST00000235329.10
RefSeq Accession: NM_014874
Protein: O95140 (aka MFN2_HUMAN)
CCDS: CCDS30587.1

-  GeneReviews for This Gene
  GeneReviews article(s) related to gene MFN2:
cmt (Charcot-Marie-Tooth Hereditary Neuropathy Overview)
cmt2a (MFN2 Hereditary Motor and Sensory Neuropathy)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.