Human Gene KLHDC9 (ENST00000368011.9) from GENCODE V44
Description: Homo sapiens kelch domain containing 9 (KLHDC9), transcript variant 1, mRNA. (from RefSeq NM_152366)
Gencode Transcript: ENST00000368011.9
Gencode Gene: ENSG00000162755.14
Transcript (Including UTRs)
Position: hg38 chr1:161,098,361-161,100,346 Size: 1,986 Total Exon Count: 4 Strand: +
Coding Region
Position: hg38 chr1:161,098,536-161,100,224 Size: 1,689 Coding Exon Count: 4
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: KLDC9_HUMAN
DESCRIPTION: RecName: Full=Kelch domain-containing protein 9; AltName: Full=Kelch/ankyrin repeat-containing cyclin A1-interacting protein;
SUBUNIT: Interacts with CCNA1.SIMILARITY: Contains 3 Kelch repeats.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR011043 - Gal_Oxase/kelch_b-propeller
IPR015915 - Kelch-typ_b-propeller
ModBase Predicted Comparative 3D Structure on Q8NEP7
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
BC032482 - Homo sapiens kelch domain containing 9, mRNA (cDNA clone MGC:40607 IMAGE:5222141), complete cds.JD439045 - Sequence 420069 from Patent EP1572962.AY601914 - Homo sapiens kelch/ankyrin repeat containing cyclin A1 interacting protein (KARCA1) mRNA, complete cds.BC022077 - Homo sapiens kelch domain containing 9, mRNA (cDNA clone MGC:33338 IMAGE:4822843), complete cds.BC066896 - Homo sapiens kelch domain containing 9, mRNA (cDNA clone MGC:86989 IMAGE:4828667), complete cds.AK093268 - Homo sapiens cDNA FLJ35949 fis, clone TESTI2012050.AX748022 - Sequence 1547 from Patent EP1308459.JD036898 - Sequence 17922 from Patent EP1572962.JD469087 - Sequence 450111 from Patent EP1572962.JD477959 - Sequence 458983 from Patent EP1572962.JD056214 - Sequence 37238 from Patent EP1572962.KJ906416 - Synthetic construct Homo sapiens clone ccsbBroadEn_16086 KLHDC9 gene, encodes complete protein.HQ448491 - Synthetic construct Homo sapiens clone IMAGE:100071923; CCSB011007_01 kelch/ankyrin repeat containing cyclin A1 interacting protein (KLHDC9) gene, encodes complete protein.KJ900109 - Synthetic construct Homo sapiens clone ccsbBroadEn_09503 KLHDC9 gene, encodes complete protein.JD298045 - Sequence 279069 from Patent EP1572962.JD200112 - Sequence 181136 from Patent EP1572962.JD515504 - Sequence 496528 from Patent EP1572962.JD538137 - Sequence 519161 from Patent EP1572962.JD384530 - Sequence 365554 from Patent EP1572962.JD529035 - Sequence 510059 from Patent EP1572962.JD040850 - Sequence 21874 from Patent EP1572962.JD267978 - Sequence 249002 from Patent EP1572962.KJ903727 - Synthetic construct Homo sapiens clone ccsbBroadEn_13121 KLHDC9 gene, encodes complete protein.JD444095 - Sequence 425119 from Patent EP1572962.DQ577846 - Homo sapiens piRNA piR-45958, complete sequence.JD250892 - Sequence 231916 from Patent EP1572962.JD285951 - Sequence 266975 from Patent EP1572962.JD449779 - Sequence 430803 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: ENST00000368011.1, ENST00000368011.2, ENST00000368011.3, ENST00000368011.4, ENST00000368011.5, ENST00000368011.6, ENST00000368011.7, ENST00000368011.8, KARCA1, KLDC9_HUMAN, NM_152366, Q5SY56, Q6NXT9, Q6PKN4, Q8N5E1, Q8NA16, Q8NEP7, uc001fxr.1, uc001fxr.2, uc001fxr.3, uc001fxr.4, uc001fxr.5UCSC ID: ENST00000368011.9RefSeq Accession: NM_152366
Protein: Q8NEP7
(aka KLDC9_HUMAN)
CCDS: CCDS30919.1
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.