Human Gene MASTL (ENST00000375940.9) from GENCODE V44
  Description: Homo sapiens microtubule associated serine/threonine kinase like (MASTL), transcript variant 6, non-coding RNA. (from RefSeq NR_135469)
RefSeq Summary (NM_001172303): This gene encodes a microtubule-associated serine/threonine kinase. Mutations at this locus have been associated with autosomal dominant thrombocytopenia, also known as thrombocytopenia-2. Alternatively spliced transcript variants have been described for this locus. [provided by RefSeq, Feb 2010]. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Gencode Transcript: ENST00000375940.9
Gencode Gene: ENSG00000120539.15
Transcript (Including UTRs)
   Position: hg38 chr10:27,155,352-27,187,953 Size: 32,602 Total Exon Count: 12 Strand: +
Coding Region
   Position: hg38 chr10:27,155,427-27,186,536 Size: 31,110 Coding Exon Count: 12 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
RNA-Seq ExpressionRNA StructureProtein StructureOther SpeciesGO AnnotationsmRNA Descriptions
PathwaysOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:27,155,352-27,187,953)mRNA (may differ from genome)Protein (879 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGencodeGeneCards
HGNCHPRDLynxMalacardsMGIneXtProt
OMIMPubMedReactomeUniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: GWL_HUMAN
DESCRIPTION: RecName: Full=Serine/threonine-protein kinase greatwall; Short=GW; Short=GWL; Short=hGWL; EC=2.7.11.1; AltName: Full=Microtubule-associated serine/threonine-protein kinase-like; Short=MAST-L;
FUNCTION: Serine/threonine kinase that plays a key role in M phase by acting as a regulator of mitosis entry and maintenance. Acts by promoting the inactivation of protein phosphatase 2A (PP2A) during M phase: does not directly inhibit PP2A but acts by mediating phosphorylation and subsequent activation of ARPP19 and ENSA at 'Ser-62' and 'Ser-67', respectively. ARPP19 and ENSA are phosphatase inhibitors that specifically inhibit the PPP2R2D (PR55-delta) subunit of PP2A. Inactivation of PP2A during M phase is essential to keep cyclin-B1-CDK1 activity high. Following DNA damage, it is also involved in checkpoint recovery by being inhibited. Phosphorylates histone protein in vitro; however such activity is unsure in vivo. May be involved in megakaryocyte differentiation.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, centrosome. Nucleus. Cleavage furrow. Note=During interphase is mainly nuclear, upon nuclear envelope breakdown localizes at the cytoplasm and during mitosis at the centrosomes. Upon mitotic exit moves to the cleavage furrow.
PTM: Phosphorylation at Thr-741 by CDK1 during M phase activates its kinase activity (By similarity). Maximum phosphorylation occurs in prometaphase.
DISEASE: Defects in MASTL are the cause of thrombocytopenia type 2 (THC2) [MIM:188000]. Thrombocytopenia is defined by a decrease in the number of platelets in circulating blood, resulting in the potential for increased bleeding and decreased ability for clotting.
MISCELLANEOUS: Reduced levels of MASTL by RNAi causes mitotic abnormalities that consist of delay in G(2) phase and slow chromosome condensation. Cells that enter and progress through mitosis often fail to completely separate their sister chromatids in anaphase leading to the formation of 4N G(1) cells subsequent to failure of cytokinesis (PubMed:20818157 and PubMed:20538976).
SIMILARITY: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
SIMILARITY: Contains 1 AGC-kinase C-terminal domain.
SIMILARITY: Contains 1 protein kinase domain.
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/MASTL";

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: MASTL
Diseases sorted by gene-association score: autosomal thrombocytopenia with normal platelets* (350), mastl-related thrombocytopenia 2* (100), thrombocytopenia 2 (27), thrombocytopenia (18), gray platelet syndrome (6)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 17.30 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 153.69 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -29.5075-0.393 Picture PostScript Text
3' UTR -397.301417-0.280 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000961 - AGC-kinase_C
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain

ModBase Predicted Comparative 3D Structure on Q96GX5
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0051721 protein phosphatase 2A binding

Biological Process:
GO:0000086 G2/M transition of mitotic cell cycle
GO:0000278 mitotic cell cycle
GO:0006468 protein phosphorylation
GO:0006974 cellular response to DNA damage stimulus
GO:0007049 cell cycle
GO:0007147 female meiosis II
GO:0016310 phosphorylation
GO:0018105 peptidyl-serine phosphorylation
GO:0032515 negative regulation of phosphoprotein phosphatase activity
GO:0035556 intracellular signal transduction
GO:0051301 cell division
GO:0051726 regulation of cell cycle
GO:1904668 positive regulation of ubiquitin protein ligase activity

Cellular Component:
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0005815 microtubule organizing center
GO:0005856 cytoskeleton
GO:0032154 cleavage furrow


-  Descriptions from all associated GenBank mRNAs
  AK123004 - Homo sapiens cDNA FLJ16800 fis, clone TESTI4003150, moderately similar to Protein kinase cek1 (EC 2.7.1.-).
LF383678 - JP 2014500723-A/191181: Polycomb-Associated Non-Coding RNAs.
MA619255 - JP 2018138019-A/191181: Polycomb-Associated Non-Coding RNAs.
AK074804 - Homo sapiens cDNA FLJ90323 fis, clone NT2RP2001769, weakly similar to SERINE/THREONINE-PROTEIN KINASE ORB6 (EC 2.7.1.-).
AK027719 - Homo sapiens cDNA FLJ14813 fis, clone NT2RP4002408, moderately similar to PROTEIN KINASE CEK1 (EC 2.7.1.-).
JD234636 - Sequence 215660 from Patent EP1572962.
BC009107 - Homo sapiens microtubule associated serine/threonine kinase-like, mRNA (cDNA clone MGC:17352 IMAGE:3449913), complete cds.
AK225319 - Homo sapiens mRNA for Splice isoform 3 of Q96GX5 variant, clone: HEP04584.
BC013704 - Homo sapiens microtubule associated serine/threonine kinase-like, mRNA (cDNA clone IMAGE:4347426), with apparent retained intron.
JD431400 - Sequence 412424 from Patent EP1572962.
JD268635 - Sequence 249659 from Patent EP1572962.
JD142534 - Sequence 123558 from Patent EP1572962.
JD222882 - Sequence 203906 from Patent EP1572962.
JD497717 - Sequence 478741 from Patent EP1572962.
JD542657 - Sequence 523681 from Patent EP1572962.
JD413281 - Sequence 394305 from Patent EP1572962.
JD413283 - Sequence 394307 from Patent EP1572962.
JD246637 - Sequence 227661 from Patent EP1572962.
JD246639 - Sequence 227663 from Patent EP1572962.
JD238074 - Sequence 219098 from Patent EP1572962.
JD238073 - Sequence 219097 from Patent EP1572962.
JD105545 - Sequence 86569 from Patent EP1572962.
JD158722 - Sequence 139746 from Patent EP1572962.
JD158723 - Sequence 139747 from Patent EP1572962.
JD275616 - Sequence 256640 from Patent EP1572962.
JD208574 - Sequence 189598 from Patent EP1572962.
JD380052 - Sequence 361076 from Patent EP1572962.
JD063166 - Sequence 44190 from Patent EP1572962.
JD155834 - Sequence 136858 from Patent EP1572962.
JD366345 - Sequence 347369 from Patent EP1572962.
JD543277 - Sequence 524301 from Patent EP1572962.
JD478591 - Sequence 459615 from Patent EP1572962.
JD463837 - Sequence 444861 from Patent EP1572962.
JD148326 - Sequence 129350 from Patent EP1572962.
JD249883 - Sequence 230907 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q96GX5 (Reactome details) participates in the following event(s):

R-HSA-2430533 CDK1 phosphorylates MASTL
R-HSA-2168079 MASTL (GWL) phosphorylates ARPP19
R-HSA-2430535 MASTL phosphorylates ENSA
R-HSA-2465910 MASTL Facilitates Mitotic Progression
R-HSA-68875 Mitotic Prophase
R-HSA-68886 M Phase
R-HSA-69278 Cell Cycle (Mitotic)
R-HSA-1640170 Cell Cycle

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000375940.1, ENST00000375940.2, ENST00000375940.3, ENST00000375940.4, ENST00000375940.5, ENST00000375940.6, ENST00000375940.7, ENST00000375940.8, GW, GWL, GWL_HUMAN, NR_135469, Q5T8D5, Q5T8D7, Q8NCD6, Q96GX5, Q96SJ5, THC2, uc001itm.1, uc001itm.2, uc001itm.3, uc001itm.4, uc001itm.5
UCSC ID: ENST00000375940.9
RefSeq Accession: NM_001172303
Protein: Q96GX5 (aka GWL_HUMAN)
CCDS: CCDS7153.1, CCDS53502.1, CCDS53503.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.