Human Gene IFTAP (ENST00000347206.8) from GENCODE V44
Description: Homo sapiens intraflagellar transport associated protein (IFTAP), transcript variant 7, mRNA. (from RefSeq NM_001276727) RefSeq Summary (NM_001276727): This gene encodes a protein that was identified as a cellular interacting partner of non-structural protein 10 of the severe acute respiratory syndrome coronavirus (SARS-CoV). The encoded protein may function as a negative regulator of transcription. There is a pseudogene for this gene on chromosome 1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2013]. Gencode Transcript: ENST00000347206.8 Gencode Gene: ENSG00000166352.18 Transcript (Including UTRs) Position: hg38 chr11:36,594,513-36,659,272 Size: 64,760 Total Exon Count: 4 Strand: + Coding Region Position: hg38 chr11:36,610,104-36,659,186 Size: 49,083 Coding Exon Count: 3
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
ModBase Predicted Comparative 3D Structure on Q86VG3
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
US Server
