Human Gene LTO1 (ENST00000536870.5) from GENCODE V44
Description: LTO1 (from geneSymbol)
Gencode Transcript: ENST00000536870.5
Gencode Gene: ENSG00000149716.13
Transcript (Including UTRs)
Position: hg38 chr11:69,665,566-69,675,323 Size: 9,758 Total Exon Count: 3 Strand: -
Coding Region
Position: hg38 chr11:69,667,519-69,675,239 Size: 7,721 Coding Exon Count: 3
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Primer design for this transcript
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
ModBase Predicted Comparative 3D Structure on F5GWS9
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AK294004 - Homo sapiens cDNA FLJ58145 complete cds, highly similar to Oral cancer overexpressed protein 1.BC006448 - Homo sapiens oral cancer overexpressed 1, mRNA (cDNA clone IMAGE:3637085).BC019024 - Homo sapiens oral cancer overexpressed 1, mRNA (cDNA clone MGC:20857 IMAGE:4544931), complete cds.BC065542 - Homo sapiens oral cancer overexpressed 1, mRNA (cDNA clone MGC:70446 IMAGE:6101144), complete cds.AF503940 - Homo sapiens TAOS1 (ORAOV1) mRNA, complete cds.AK126490 - Homo sapiens cDNA FLJ44526 fis, clone UTERU3003465.AK125280 - Homo sapiens cDNA FLJ43290 fis, clone MESAN2014295.JD550928 - Sequence 531952 from Patent EP1572962.JD111058 - Sequence 92082 from Patent EP1572962.JD508544 - Sequence 489568 from Patent EP1572962.JD451951 - Sequence 432975 from Patent EP1572962.JD435561 - Sequence 416585 from Patent EP1572962.JD429577 - Sequence 410601 from Patent EP1572962.JD477395 - Sequence 458419 from Patent EP1572962.JD535757 - Sequence 516781 from Patent EP1572962.JD272724 - Sequence 253748 from Patent EP1572962.JD081577 - Sequence 62601 from Patent EP1572962.JD157620 - Sequence 138644 from Patent EP1572962.JD311782 - Sequence 292806 from Patent EP1572962.JD094115 - Sequence 75139 from Patent EP1572962.JD064670 - Sequence 45694 from Patent EP1572962.JD242927 - Sequence 223951 from Patent EP1572962.JD153332 - Sequence 134356 from Patent EP1572962.JD215812 - Sequence 196836 from Patent EP1572962.JD272553 - Sequence 253577 from Patent EP1572962.JD453854 - Sequence 434878 from Patent EP1572962.JD466205 - Sequence 447229 from Patent EP1572962.JD525091 - Sequence 506115 from Patent EP1572962.JD098135 - Sequence 79159 from Patent EP1572962.JD347217 - Sequence 328241 from Patent EP1572962.JD113581 - Sequence 94605 from Patent EP1572962.JD398857 - Sequence 379881 from Patent EP1572962.AK054816 - Homo sapiens cDNA FLJ30254 fis, clone BRACE2002441, highly similar to Ferritin heavy chain (EC 1.16.3.1).JD416580 - Sequence 397604 from Patent EP1572962.JD069274 - Sequence 50298 from Patent EP1572962.JD118639 - Sequence 99663 from Patent EP1572962.JD088356 - Sequence 69380 from Patent EP1572962.JD553744 - Sequence 534768 from Patent EP1572962.JD396702 - Sequence 377726 from Patent EP1572962.JD231274 - Sequence 212298 from Patent EP1572962.JD520513 - Sequence 501537 from Patent EP1572962.EF639695 - Homo sapiens oral cancer overexpressed protein 1-A (ORAOV1) mRNA, complete cds, alternatively spliced.JX460858 - Homo sapiens oral cancer overexpressed 1 (ORAOV1) mRNA, partial cds, alternatively spliced.KC427269 - Homo sapiens non-coding RNA oral cancer-overexpressed 1 (ORAOV1), partial sequence, alternatively spliced.AK311918 - Homo sapiens cDNA, FLJ92185, Homo sapiens oral cancer overexpressed 1 (ORAOV1), mRNA.KJ895846 - Synthetic construct Homo sapiens clone ccsbBroadEn_05240 ORAOV1 gene, encodes complete protein.AK026600 - Homo sapiens cDNA: FLJ22947 fis, clone KAT09234.JD102290 - Sequence 83314 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: AK125280, ENST00000536870.1, ENST00000536870.2, ENST00000536870.3, ENST00000536870.4, F5GWS9, F5GWS9_HUMAN, ORAOV1, uc001opd.1, uc001opd.2, uc001opd.3, uc001opd.4UCSC ID: ENST00000536870.5RefSeq Accession: NM_153451
Protein: F5GWS9
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.