Human Gene NAA25 (ENST00000261745.9) from GENCODE V44
  Description: Homo sapiens N-alpha-acetyltransferase 25, NatB auxiliary subunit (NAA25), mRNA. (from RefSeq NM_024953)
RefSeq Summary (NM_024953): This gene encodes the auxiliary subunit of the heteromeric N-terminal acetyltransferase B complex. This complex acetylates methionine residues that are followed by acidic or asparagine residues.[provided by RefSeq, Mar 2010].
Gencode Transcript: ENST00000261745.9
Gencode Gene: ENSG00000111300.10
Transcript (Including UTRs)
   Position: hg38 chr12:112,026,689-112,108,783 Size: 82,095 Total Exon Count: 24 Strand: -
Coding Region
   Position: hg38 chr12:112,029,531-112,108,773 Size: 79,243 Coding Exon Count: 24 

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RNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:112,026,689-112,108,783)mRNA (may differ from genome)Protein (972 aa)
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-  Comments and Description Text from UniProtKB
  ID: NAA25_HUMAN
DESCRIPTION: RecName: Full=N-alpha-acetyltransferase 25, NatB auxiliary subunit; AltName: Full=Mitochondrial distribution and morphology protein 20; AltName: Full=N-terminal acetyltransferase B complex subunit MDM20; Short=NatB complex subunit MDM20; AltName: Full=N-terminal acetyltransferase B complex subunit NAA25; AltName: Full=p120;
FUNCTION: Non-catalytic subunit of the NatB complex which catalyzes acetylation of the N-terminal methionine residues of peptides beginning with Met-Asp-Glu. May play a role in normal cell-cycle progression.
SUBUNIT: Component of the N-terminal acetyltransferase B (NatB) complex which is composed of NAA20 and NAA25.
INTERACTION: P24941:CDK2; NbExp=1; IntAct=EBI-1048503, EBI-375096;
SUBCELLULAR LOCATION: Cytoplasm.
SIMILARITY: Belongs to the MDM20/NAA25 family.
SIMILARITY: Contains 4 TPR repeats.
SEQUENCE CAUTION: Sequence=BAB14432.1; Type=Erroneous initiation; Sequence=CAE46062.1; Type=Erroneous initiation;

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: NAA25
Diseases sorted by gene-association score: ogden syndrome (2), rheumatoid arthritis, systemic juvenile (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 10.26 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 267.89 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
3' UTR -704.202842-0.248 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR019183 - N-acetylTrfase_B_cplx_non-cat
IPR013026 - TPR-contain_dom
IPR011990 - TPR-like_helical

Pfam Domains:
PF09797 - N-acetyltransferase B complex (NatB) non catalytic subunit

ModBase Predicted Comparative 3D Structure on Q14CX7
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
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-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004596 peptide alpha-N-acetyltransferase activity

Biological Process:
GO:0017196 N-terminal peptidyl-methionine acetylation

Cellular Component:
GO:0005737 cytoplasm
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0031416 NatB complex


-  Descriptions from all associated GenBank mRNAs
  BX647450 - Homo sapiens mRNA; cDNA DKFZp451H017 (from clone DKFZp451H017).
BX641140 - Homo sapiens mRNA; cDNA DKFZp686H03169 (from clone DKFZp686H03169).
AK023151 - Homo sapiens cDNA FLJ13089 fis, clone NT2RP3002108, weakly similar to DEC1 PROTEIN.
BC113587 - Homo sapiens chromosome 12 open reading frame 30, mRNA (cDNA clone MGC:142147 IMAGE:8322639), complete cds.
BC113585 - Homo sapiens chromosome 12 open reading frame 30, mRNA (cDNA clone MGC:142145 IMAGE:8322637), complete cds.
AK292485 - Homo sapiens cDNA FLJ75187 complete cds, highly similar to Homo sapiens nap1 mRNA for P120.
AB054990 - Homo sapiens nap1 mRNA for P120, complete cds.
AK309772 - Homo sapiens cDNA, FLJ99813.
BX647992 - Homo sapiens mRNA; cDNA DKFZp686P0152 (from clone DKFZp686P0152).
BC065481 - Homo sapiens chromosome 12 open reading frame 30, mRNA (cDNA clone IMAGE:5932893).
BC095484 - Homo sapiens cDNA clone IMAGE:30344867, containing frame-shift errors.
BC034357 - Homo sapiens chromosome 12 open reading frame 30, mRNA (cDNA clone IMAGE:3867555), partial cds.
AK307494 - Homo sapiens cDNA, FLJ97442.
BC047640 - Homo sapiens chromosome 12 open reading frame 30, mRNA (cDNA clone IMAGE:4823837).
AL832394 - Homo sapiens mRNA; cDNA DKFZp667K2112 (from clone DKFZp667K2112).
JD419228 - Sequence 400252 from Patent EP1572962.
JD163140 - Sequence 144164 from Patent EP1572962.
JD494992 - Sequence 476016 from Patent EP1572962.
JD474932 - Sequence 455956 from Patent EP1572962.
JD451091 - Sequence 432115 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  BioCyc Knowledge Library
PWY-7799 - Arg/N-end rule pathway (eukaryotic)

-  Other Names for This Gene
  Alternate Gene Symbols: A0JLU7, C12orf30, ENST00000261745.1, ENST00000261745.2, ENST00000261745.3, ENST00000261745.4, ENST00000261745.5, ENST00000261745.6, ENST00000261745.7, ENST00000261745.8, MDM20, NAA25_HUMAN, NAP1, NM_024953, Q14CX7, Q6MZH1, Q7Z4N6, Q9H911, uc001ttm.1, uc001ttm.2, uc001ttm.3, uc001ttm.4, uc001ttm.5
UCSC ID: ENST00000261745.9
RefSeq Accession: NM_024953
Protein: Q14CX7 (aka NAA25_HUMAN)
CCDS: CCDS9159.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.