Human Gene ZNF519 (ENST00000589203.5) from GENCODE V44
  Description: Homo sapiens zinc finger protein 519 (ZNF519), transcript variant 2, non-coding RNA. (from RefSeq NR_033354)
Gencode Transcript: ENST00000589203.5
Gencode Gene: ENSG00000175322.12
Transcript (Including UTRs)
   Position: hg38 chr18:14,071,122-14,132,453 Size: 61,332 Total Exon Count: 6 Strand: -


Page IndexSequence and LinksPrimersMalaCardsCTDRNA-Seq Expression
Microarray ExpressionOther SpeciesmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr18:14,071,122-14,132,453)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
EnsemblEntrez GeneExonPrimerGencodeHGNCLynx
MalacardsPubMedBioGrid CRISPR DB

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: ZNF519
Diseases sorted by gene-association score: anonychia congenita (13), nail disease (10)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.88 RPKM in Brain - Cerebellar Hemisphere
Total median expression: 32.40 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  JD337225 - Sequence 318249 from Patent EP1572962.
JD417750 - Sequence 398774 from Patent EP1572962.
JD376812 - Sequence 357836 from Patent EP1572962.
JD533666 - Sequence 514690 from Patent EP1572962.
JD291717 - Sequence 272741 from Patent EP1572962.
JD421861 - Sequence 402885 from Patent EP1572962.
JD421859 - Sequence 402883 from Patent EP1572962.
JD377008 - Sequence 358032 from Patent EP1572962.
JD510623 - Sequence 491647 from Patent EP1572962.
BC037787 - Homo sapiens zinc finger protein 519, mRNA (cDNA clone IMAGE:4792135).
AK096748 - Homo sapiens cDNA FLJ39429 fis, clone PROST2002101.
JD032877 - Sequence 13901 from Patent EP1572962.
JD023247 - Sequence 4271 from Patent EP1572962.
BC010705 - Homo sapiens zinc finger protein 519, mRNA (cDNA clone IMAGE:3872023), with apparent retained intron.
BC024227 - Homo sapiens zinc finger protein 519, mRNA (cDNA clone MGC:27166 IMAGE:4806717), complete cds.
JD133734 - Sequence 114758 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000589203.1, ENST00000589203.2, ENST00000589203.3, ENST00000589203.4, NR_033354, uc002ksr.1, uc002ksr.2, uc002ksr.3
UCSC ID: ENST00000589203.5
RefSeq Accession: NR_033354

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.