Human Gene PIAS2 (ENST00000324794.11) from GENCODE V44
  Description: Homo sapiens protein inhibitor of activated STAT 2 (PIAS2), transcript variant 22, non-coding RNA. (from RefSeq NR_148699)
RefSeq Summary (NM_173206): This gene encodes a member of the protein inhibitor of activated STAT family, which function as SUMO E3 ligases and play important roles in many cellular processes by mediating the sumoylation of target proteins. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. Isoforms of the encoded protein enhance the sumoylation of specific target proteins including the p53 tumor suppressor protein, c-Jun, and the androgen receptor. A pseudogene of this gene is located on the short arm of chromosome 4. The symbol MIZ1 has also been associated with ZBTB17 which is a different gene located on chromosome 1. [provided by RefSeq, Aug 2017].
Gencode Transcript: ENST00000324794.11
Gencode Gene: ENSG00000078043.16
Transcript (Including UTRs)
   Position: hg38 chr18:46,815,711-46,917,503 Size: 101,793 Total Exon Count: 13 Strand: -
Coding Region
   Position: hg38 chr18:46,818,377-46,917,345 Size: 98,969 Coding Exon Count: 13 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDRNA-Seq Expression
Microarray ExpressionRNA StructureProtein StructureOther SpeciesGO AnnotationsmRNA Descriptions
PathwaysOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr18:46,815,711-46,917,503)mRNA (may differ from genome)Protein (572 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGencodeGeneCards
HGNCHPRDLynxMalacardsMGIneXtProt
OMIMPubMedReactomeUniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: PIAS2_HUMAN
DESCRIPTION: RecName: Full=E3 SUMO-protein ligase PIAS2; EC=6.3.2.-; AltName: Full=Androgen receptor-interacting protein 3; Short=ARIP3; AltName: Full=DAB2-interacting protein; Short=DIP; AltName: Full=Msx-interacting zinc finger protein; Short=Miz1; AltName: Full=PIAS-NY protein; AltName: Full=Protein inhibitor of activated STAT x; AltName: Full=Protein inhibitor of activated STAT2;
FUNCTION: Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase, stabilizing the interaction between UBE2I and the substrate, and as a SUMO-tethering factor. Plays a crucial role as a transcriptional coregulator in various cellular pathways, including the STAT pathway, the p53 pathway and the steroid hormone signaling pathway. The effects of this transcriptional coregulation, transactivation or silencing may vary depending upon the biological context and the PIAS2 isoform studied. However, it seems to be mostly involved in gene silencing. Binds to sumoylated ELK1 and enhances its transcriptional activity by preventing recruitment of HDAC2 by ELK1, thus reversing SUMO-mediated repression of ELK1 transactivation activity. Isoform PIAS2-beta, but not isoform PIAS2-alpha, promotes MDM2 sumoylation. Isoform PIAS2-alpha promotes PARK7 sumoylation. Isoform PIAS2-beta promotes NCOA2 sumoylation more efficiently than isoform PIAS2- alpha.
PATHWAY: Protein modification; protein sumoylation.
SUBUNIT: Binds SUMO1 and UBE2I. Interacts with AXIN1, JUN, MDM2, PARK7, TP53 and TP73 isoform alpha, but not TP73 isoform beta. Interacts with STAT4 following IL12 and IFN-alpha stimulation of T-cells. Interacts also with GTF2I, GTF2IRD1, IKFZ1, DAB2 and MSX2, as well as with several steroid receptors, including ESR1, ESR2, NR3C1, PGR, AR, and with NCOA2 (By similarity). Sumoylation of a target protein seems to enhance the interaction. Binds to sumoylated ELK1. Binds DNA, such as CDKN1A promoter, in a sequence-specific manner. Interacts with PLAG1. Interacts with KLF8; the interaction results in SUMO ligation and repression of KLF8 transcriptional activity and of its cell cycle progression into G(1) phase. PIAS2-beta interacts with IFIH1/MDA5.
INTERACTION: P01106:MYC; NbExp=4; IntAct=EBI-348555, EBI-447544; Q96T51:RUFY1; NbExp=3; IntAct=EBI-348555, EBI-3941207; P63279:UBE2I; NbExp=5; IntAct=EBI-348555, EBI-80168;
SUBCELLULAR LOCATION: Nucleus speckle. Nucleus, PML body. Note=Colocalizes at least partially with promyelocytic leukemia nuclear bodies (PML NBs).
TISSUE SPECIFICITY: Mainly expressed in testis. Isoform 3 is expressed predominantly in adult testis, weakly in pancreas, embryonic testis and sperm, and at very low levels in other organs.
DEVELOPMENTAL STAGE: Isoform 3 expression in adult testis is 14.2- fold stronger than in embryonic testis.
INDUCTION: Up-regulated transiently during myeloid differentiation in various cells lines, such as HL-60, U-937, K-562, induced by either phorbol ester (TPA) or retinoic acid.
DOMAIN: The LXXLL motif is a transcriptional coregulator signature.
PTM: Sumoylated.
SIMILARITY: Belongs to the PIAS family.
SIMILARITY: Contains 1 PINIT domain.
SIMILARITY: Contains 1 SAP domain.
SIMILARITY: Contains 1 SP-RING-type zinc finger.

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

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To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 24.52 RPKM in Testis
Total median expression: 197.93 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -93.10158-0.589 Picture PostScript Text
3' UTR -616.702666-0.231 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR023321 - PINIT
IPR003034 - SAP_DNA-bd
IPR004181 - Znf_MIZ

Pfam Domains:
PF14324 - PINIT domain
PF02891 - MIZ/SP-RING zinc finger

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2ASQ - NMR MuPIT 4FO9 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on O75928
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003677 DNA binding
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0008134 transcription factor binding
GO:0008270 zinc ion binding
GO:0016740 transferase activity
GO:0019789 SUMO transferase activity
GO:0031625 ubiquitin protein ligase binding
GO:0046872 metal ion binding
GO:0050681 androgen receptor binding
GO:0061665 SUMO ligase activity

Biological Process:
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0016925 protein sumoylation
GO:0030521 androgen receptor signaling pathway
GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity
GO:0045667 regulation of osteoblast differentiation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0060766 negative regulation of androgen receptor signaling pathway

Cellular Component:
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0016604 nuclear body
GO:0016605 PML body
GO:0016607 nuclear speck


-  Descriptions from all associated GenBank mRNAs
  AK308143 - Homo sapiens cDNA, FLJ98091.
AF077954 - Homo sapiens protein inhibitor of activated STAT protein PIASx-beta mRNA, complete cds.
AB527541 - Synthetic construct DNA, clone: pF1KB6117, Homo sapiens PIAS2 gene for protein inhibitor of activated STAT, 2, without stop codon, in Flexi system.
JD130747 - Sequence 111771 from Patent EP1572962.
AK294801 - Homo sapiens cDNA FLJ57366 complete cds, highly similar to Protein inhibitor of activated STAT2.
BC015190 - Homo sapiens protein inhibitor of activated STAT, 2, mRNA (cDNA clone MGC:14633 IMAGE:4080297), complete cds.
KJ897959 - Synthetic construct Homo sapiens clone ccsbBroadEn_07353 PIAS2 gene, encodes complete protein.
AF077953 - Homo sapiens protein inhibitor of activated STAT protein PIASx-alpha mRNA, complete cds.
DQ896421 - Synthetic construct Homo sapiens clone IMAGE:100010881; FLH194158.01L; RZPDo839G0169D protein inhibitor of activated STAT, 2 (PIAS2) gene, encodes complete protein.
EU176432 - Synthetic construct Homo sapiens clone IMAGE:100006509; FLH194165.01X; RZPDo839C07252D protein inhibitor of activated STAT, 2 (PIAS2) gene, encodes complete protein.
BC111060 - Homo sapiens protein inhibitor of activated STAT, 2, mRNA (cDNA clone MGC:102682 IMAGE:5745101), complete cds.
AF361054 - Homo sapiens PIAS-NY protein mRNA, complete cds.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
hsa04120 - Ubiquitin mediated proteolysis
hsa04630 - Jak-STAT signaling pathway
hsa05200 - Pathways in cancer
hsa05222 - Small cell lung cancer

BioCarta from NCI Cancer Genome Anatomy Project
h_ranbp2Pathway - Sumoylation by RanBP2 Regulates Transcriptional Repression

Reactome (by CSHL, EBI, and GO)

Protein O75928 (Reactome details) participates in the following event(s):

R-HSA-4615873 PIAS2-2 SUMOylates SUZ12 with SUMO1
R-HSA-4551638 SUMOylation of chromatin organization proteins
R-HSA-3108232 SUMO E3 ligases SUMOylate target proteins
R-HSA-2990846 SUMOylation
R-HSA-597592 Post-translational protein modification
R-HSA-392499 Metabolism of proteins
R-HSA-4090281 PIAS1,2-1 SUMOylate HIC1 with SUMO1
R-HSA-4568848 PIAS1,2-1 SUMOylates XRCC4 with SUMO1
R-HSA-3232118 SUMOylation of transcription factors
R-HSA-3108214 SUMOylation of DNA damage response and repair proteins
R-HSA-3108232 SUMO E3 ligases SUMOylate target proteins
R-HSA-2990846 SUMOylation
R-HSA-597592 Post-translational protein modification
R-HSA-392499 Metabolism of proteins

-  Other Names for This Gene
  Alternate Gene Symbols: ENST00000324794.1, ENST00000324794.10, ENST00000324794.2, ENST00000324794.3, ENST00000324794.4, ENST00000324794.5, ENST00000324794.6, ENST00000324794.7, ENST00000324794.8, ENST00000324794.9, NR_148699, O75927, O75928, PIAS2_HUMAN, PIASX, Q96BT5, Q96KE3, uc002lcl.1, uc002lcl.2, uc002lcl.3, uc002lcl.4
UCSC ID: ENST00000324794.11
RefSeq Accession: NM_173206
Protein: O75928 (aka PIAS2_HUMAN)
CCDS: CCDS32825.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.