Human Gene ZNF44 (ENST00000483826.1) from GENCODE V44
  Description: zinc finger protein 44 (from HGNC ZNF44)
Gencode Transcript: ENST00000483826.1
Gencode Gene: ENSG00000197857.16
Transcript (Including UTRs)
   Position: hg38 chr19:12,291,028-12,294,880 Size: 3,853 Total Exon Count: 3 Strand: -


Page IndexSequence and LinksPrimersMalaCardsCTDRNA-Seq Expression
Microarray ExpressionOther SpeciesmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:12,291,028-12,294,880)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSEnsemblExonPrimerGencodeHGNCLynx
MalacardsPubMedWikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: ZNF44
Diseases sorted by gene-association score: split hand-foot malformation 1 (7), enamel erosion (6)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 6.57 RPKM in Testis
Total median expression: 137.61 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC032246 - Homo sapiens zinc finger protein 44, mRNA (cDNA clone IMAGE:5202234).
KJ902616 - Synthetic construct Homo sapiens clone ccsbBroadEn_12010 ZNF44 gene, encodes complete protein.
BC136502 - Homo sapiens zinc finger protein 44, mRNA (cDNA clone MGC:168114 IMAGE:9020491), complete cds.
AB021642 - Homo sapiens GIOT-2 mRNA for gonadotropin inducible transcription repressor-2, complete cds.
AK297528 - Homo sapiens cDNA FLJ58588 complete cds, highly similar to Zinc finger protein 44.
BC001868 - Homo sapiens zinc finger protein 44, mRNA (cDNA clone IMAGE:3544853).
KJ902617 - Synthetic construct Homo sapiens clone ccsbBroadEn_12011 ZNF44 gene, encodes complete protein.
JD393286 - Sequence 374310 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BC001868, uc002mto.1, uc002mto.2, uc002mto.3, uc002mto.4, uc002mto.5
UCSC ID: ENST00000483826.1
RefSeq Accession: NM_001353549

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.