Human Gene CEACAM21 (ENST00000407170.6) from GENCODE V44
Description: Homo sapiens CEA cell adhesion molecule 21 (CEACAM21), transcript variant 4, mRNA. (from RefSeq NM_001290113)
Gencode Transcript: ENST00000407170.6
Gencode Gene: ENSG00000007129.18
Transcript (Including UTRs)
Position: hg38 chr19:41,549,518-41,586,843 Size: 37,326 Total Exon Count: 8 Strand: +
Coding Region
Position: hg38 chr19:41,579,313-41,585,871 Size: 6,559 Coding Exon Count: 4
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AX775927 - Sequence 197 from Patent WO03048202.AK023602 - Homo sapiens cDNA FLJ13540 fis, clone PLACE1006754, weakly similar to BILIARY GLYCOPROTEIN 1 PRECURSOR.BC012001 - Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 21, mRNA (cDNA clone MGC:21758 IMAGE:4540619), complete cds.AY358084 - Homo sapiens clone DNA119477 CEACAM3 (UNQ3098) mRNA, complete cds.BC106727 - Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 21, mRNA (cDNA clone MGC:119874 IMAGE:40015070), complete cds.KJ895115 - Synthetic construct Homo sapiens clone ccsbBroadEn_04509 CEACAM21 gene, encodes complete protein.KJ904938 - Synthetic construct Homo sapiens clone ccsbBroadEn_14332 CEACAM21 gene, encodes complete protein.CU680160 - Synthetic construct Homo sapiens gateway clone IMAGE:100020624 5' read CEACAM21 mRNA.JD437338 - Sequence 418362 from Patent EP1572962.JD190051 - Sequence 171075 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: A0A0B4J1W4, ENST00000407170.1, ENST00000407170.2, ENST00000407170.3, ENST00000407170.4, ENST00000407170.5, NM_001290113, uc002orc.1, uc002orc.2, uc002orc.3UCSC ID: ENST00000407170.6RefSeq Accession: NM_001288773
CCDS: CCDS74373.1
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.