Human Gene YPEL5 (ENST00000261353.9) from GENCODE V44
Description: Homo sapiens yippee like 5 (YPEL5), transcript variant 4, mRNA. (from RefSeq NM_016061)
Gencode Transcript: ENST00000261353.9
Gencode Gene: ENSG00000119801.13
Transcript (Including UTRs)
Position: hg38 chr2:30,147,007-30,160,533 Size: 13,527 Total Exon Count: 3 Strand: +
Coding Region
Position: hg38 chr2:30,156,652-30,158,843 Size: 2,192 Coding Exon Count: 2
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: YPEL5_HUMAN
DESCRIPTION: RecName: Full=Protein yippee-like 5;
SIMILARITY: Belongs to the yippee family.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR002579 - Met_Sox_Rdtase_MsrB
IPR004910 - Yippee
Pfam Domains: PF03226 - Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
ModBase Predicted Comparative 3D Structure on P62699
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
AF151885 - Homo sapiens CGI-127 protein mRNA, complete cds.AF172940 - Homo sapiens Yippee protein mRNA, partial cds.AF135161 - Homo sapiens unknown mRNA.JD139053 - Sequence 120077 from Patent EP1572962.JD445968 - Sequence 426992 from Patent EP1572962.AK307099 - Homo sapiens cDNA, FLJ97047.AK311404 - Homo sapiens cDNA, FLJ18446.AK025730 - Homo sapiens cDNA: FLJ22077 fis, clone HEP12728, highly similar to AF151885 Homo sapiens CGI-127 protein mRNA.BC000836 - Homo sapiens yippee-like 5 (Drosophila), mRNA (cDNA clone MGC:4873 IMAGE:3456031), complete cds.JD071552 - Sequence 52576 from Patent EP1572962.BC047237 - Homo sapiens yippee-like 5 (Drosophila), mRNA (cDNA clone MGC:57416 IMAGE:5269563), complete cds.AB098739 - Homo sapiens YPEL5 mRNA for yippee-like 5, complete cds.DQ591527 - Homo sapiens piRNA piR-58639, complete sequence.JD328668 - Sequence 309692 from Patent EP1572962.JD021499 - Sequence 2523 from Patent EP1572962.JD031936 - Sequence 12960 from Patent EP1572962.JD086959 - Sequence 67983 from Patent EP1572962.JD089706 - Sequence 70730 from Patent EP1572962.JD306677 - Sequence 287701 from Patent EP1572962.JD360841 - Sequence 341865 from Patent EP1572962.JD273082 - Sequence 254106 from Patent EP1572962.JD287933 - Sequence 268957 from Patent EP1572962.JD514578 - Sequence 495602 from Patent EP1572962.JD371713 - Sequence 352737 from Patent EP1572962.JD261510 - Sequence 242534 from Patent EP1572962.JD164728 - Sequence 145752 from Patent EP1572962.JD290279 - Sequence 271303 from Patent EP1572962.JD414002 - Sequence 395026 from Patent EP1572962.JD048506 - Sequence 29530 from Patent EP1572962.JD271376 - Sequence 252400 from Patent EP1572962.JD224270 - Sequence 205294 from Patent EP1572962.JD237647 - Sequence 218671 from Patent EP1572962.JD147386 - Sequence 128410 from Patent EP1572962.JD351406 - Sequence 332430 from Patent EP1572962.JD298311 - Sequence 279335 from Patent EP1572962.JD370932 - Sequence 351956 from Patent EP1572962.
Biochemical and Signaling Pathways
Other Names for This Gene
Alternate Gene Symbols: CGI-127, D6W568, ENST00000261353.1, ENST00000261353.2, ENST00000261353.3, ENST00000261353.4, ENST00000261353.5, ENST00000261353.6, ENST00000261353.7, ENST00000261353.8, NM_016061, P62699, Q65Z97, Q8R174, Q9D6M1, Q9UMX7, Q9Y3C9, uc002rmz.1, uc002rmz.2, uc002rmz.3, uc002rmz.4, uc002rmz.5, uc002rmz.6, YPEL5_HUMANUCSC ID: ENST00000261353.9RefSeq Accession: NM_016061
Protein: P62699
(aka YPEL5_HUMAN or YPL5_HUMAN)
CCDS: CCDS1771.1
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.