Human Gene HYCC2 (ENST00000498780.5) from GENCODE V44
  Description: HYCC2 (from geneSymbol)
Gencode Transcript: ENST00000498780.5
Gencode Gene: ENSG00000155744.10
Transcript (Including UTRs)
   Position: hg38 chr2:200,996,050-201,071,669 Size: 75,620 Total Exon Count: 8 Strand: -


Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:200,996,050-201,071,669)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerGencodeLynxMalacardsPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 10.56 RPKM in Brain - Cerebellar Hemisphere
Total median expression: 160.06 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AL832346 - Homo sapiens mRNA; cDNA DKFZp451A156 (from clone DKFZp451A156).
LP895420 - Sequence 284 from Patent EP3253886.
AL832234 - Homo sapiens mRNA; cDNA DKFZp686I0153 (from clone DKFZp686I0153).
AL833403 - Homo sapiens mRNA; cDNA DKFZp313I1420 (from clone DKFZp313I1420).
BC039295 - Homo sapiens family with sequence similarity 126, member B, mRNA (cDNA clone MGC:39518 IMAGE:5267063), complete cds.
AK315104 - Homo sapiens cDNA, FLJ96062.
AK124184 - Homo sapiens cDNA FLJ42190 fis, clone THYMU2032825, moderately similar to Down-regulated by CTNNB1 protein A.
AK097111 - Homo sapiens cDNA FLJ39792 fis, clone SPLEN2003396, weakly similar to Down-regulated by CTNNB1 protein A.
DQ891522 - Synthetic construct clone IMAGE:100004152; FLH177696.01X; RZPDo839D01126D hypothetical protein MGC39518 (MGC39518) gene, encodes complete protein.
KJ900579 - Synthetic construct Homo sapiens clone ccsbBroadEn_09973 FAM126B gene, encodes complete protein.
DQ894712 - Synthetic construct Homo sapiens clone IMAGE:100009172; FLH177692.01L; RZPDo839D01125D hypothetical protein MGC39518 (MGC39518) gene, encodes complete protein.
AB527318 - Synthetic construct DNA, clone: pF1KE0029, Homo sapiens FAM126B gene for family with sequence similarity 126, member B, without stop codon, in Flexi system.
AM393170 - Synthetic construct Homo sapiens clone IMAGE:100002525 for hypothetical protein (MGC39518 gene).
AK124937 - Homo sapiens cDNA FLJ42947 fis, clone BRSTN2006134.
CU691706 - Synthetic construct Homo sapiens gateway clone IMAGE:100019793 5' read FAM126B mRNA.
JD065665 - Sequence 46689 from Patent EP1572962.
JD331426 - Sequence 312450 from Patent EP1572962.
JD172271 - Sequence 153295 from Patent EP1572962.
JD200567 - Sequence 181591 from Patent EP1572962.
JD272586 - Sequence 253610 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AK124184, ENST00000498780.1, ENST00000498780.2, ENST00000498780.3, ENST00000498780.4, uc002uww.1, uc002uww.2
UCSC ID: ENST00000498780.5
RefSeq Accession: NM_173822

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.