Human Gene CHST2 (ENST00000309575.5) from GENCODE V44
Description: Homo sapiens carbohydrate sulfotransferase 2 (CHST2), mRNA. (from RefSeq NM_004267) RefSeq Summary (NM_004267): This locus encodes a sulfotransferase protein. The encoded enzyme catalyzes the sulfation of a nonreducing N-acetylglucosamine residue, and may play a role in biosynthesis of 6-sulfosialyl Lewis X antigen. [provided by RefSeq, Aug 2011]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Gencode Transcript: ENST00000309575.5 Gencode Gene: ENSG00000175040.6 Transcript (Including UTRs) Position: hg38 chr3:143,119,771-143,124,014 Size: 4,244 Total Exon Count: 2 Strand: + Coding Region Position: hg38 chr3:143,120,817-143,122,409 Size: 1,593 Coding Exon Count: 1
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
US Server
