Human Gene SLC2A9 (ENST00000481042.1) from GENCODE V44
  Description: solute carrier family 2 member 9 (from HGNC SLC2A9)
RefSeq Summary (NM_001001290): This gene encodes a member of the SLC2A facilitative glucose transporter family. Members of this family play a significant role in maintaining glucose homeostasis. The encoded protein may play a role in the development and survival of chondrocytes in cartilage matrices. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008].
Gencode Transcript: ENST00000481042.1
Gencode Gene: ENSG00000109667.12
Transcript (Including UTRs)
   Position: hg38 chr4:10,034,225-10,040,388 Size: 6,164 Total Exon Count: 2 Strand: -


Page IndexSequence and LinksPrimersMalaCardsCTDRNA-Seq Expression
Microarray ExpressionOther SpeciesmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr4:10,034,225-10,040,388)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
EnsemblExonPrimerGencodeHGNCLynxMalacards
myGene2PubMedWikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: SLC2A9
Diseases sorted by gene-association score: hypouricemia, renal, 2* (1380), hypouricemia, renal* (268), gout (16), nephrolithiasis (10), acquired polycythemia (7), hyperuricemia (7), epidural abscess (6), xanthinuria (6)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 3.98 RPKM in Kidney - Cortex
Total median expression: 36.36 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC018897 - Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 9, mRNA (cDNA clone MGC:11313 IMAGE:3949549), complete cds.
AK310895 - Homo sapiens cDNA, FLJ17937.
AK096819 - Homo sapiens cDNA FLJ39500 fis, clone PROST2016829.

-  Other Names for This Gene
  Alternate Gene Symbols: AK096819, uc003gme.1, uc003gme.2
UCSC ID: ENST00000481042.1
RefSeq Accession: NM_001001290

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.