Human Gene ZCCHC13 (ENST00000339534.4) from GENCODE V44
Description: Homo sapiens zinc finger CCHC-type containing 13 (ZCCHC13), mRNA. (from RefSeq NM_203303) RefSeq Summary (NM_203303): This gene appears to represent an intronless retrocopy of a related multi-exon gene located on chromosome 3. However, the CDS of this intronless gene remains relatively intact, it is conserved in other mammalian species, it is known to be transcribed, and it is therefore thought to encode a functional protein. The encoded protein contains six CCHC-type zinc fingers, and is thus thought to function as a transcription factor. [provided by RefSeq, May 2010]. Gencode Transcript: ENST00000339534.4 Gencode Gene: ENSG00000187969.6 Transcript (Including UTRs) Position: hg38 chrX:74,304,180-74,305,034 Size: 855 Total Exon Count: 1 Strand: + Coding Region Position: hg38 chrX:74,304,267-74,304,767 Size: 501 Coding Exon Count: 1
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q8WW36
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.