Human Gene BAZ2B (ENST00000482503.5) from GENCODE V44
  Description: bromodomain adjacent to zinc finger domain 2B (from HGNC BAZ2B)
RefSeq Summary (NM_001329858): This gene belongs to the bromodomain gene family. Members of this gene family encode proteins that are integral components of chromatin remodeling complexes. The encoded protein showed strong preference for the activating H3K14Ac mark in a histone peptide screen, suggesting a potential role in transcriptional activation. This gene may be associated with susceptibility to sudden cardiac death (SCD). [provided by RefSeq, Aug 2016].
Gencode Transcript: ENST00000482503.5
Gencode Gene: ENSG00000123636.19
Transcript (Including UTRs)
   Position: hg38 chr2:159,438,303-159,516,659 Size: 78,357 Total Exon Count: 7 Strand: -


Page IndexSequence and LinksPrimersCTDRNA-Seq ExpressionMicroarray Expression
Other SpeciesmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:159,438,303-159,516,659)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSEnsemblExonPrimerGencodeHGNCLynx
MalacardsPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 5.96 RPKM in Ovary
Total median expression: 166.71 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AB032255 - Homo sapiens BAZ2B mRNA for bromodomain adjacent to zinc finger domain 2B, complete cds.
AB040909 - Homo sapiens KIAA1476 mRNA for KIAA1476 protein.
BC156487 - Synthetic construct Homo sapiens clone IMAGE:100062995, MGC:190657 bromodomain adjacent to zinc finger domain, 2B (BAZ2B) mRNA, encodes complete protein.
AK127551 - Homo sapiens cDNA FLJ45644 fis, clone CTONG2001932, moderately similar to Homo sapiens bromodomain adjacent to zinc finger domain, 2A (BAZ2A).
AK307683 - Homo sapiens cDNA, FLJ97631.
AL834381 - Homo sapiens mRNA; cDNA DKFZp762I0516 (from clone DKFZp762I0516).
BX641037 - Homo sapiens mRNA; cDNA DKFZp686H10114 (from clone DKFZp686H10114).
BC107570 - Homo sapiens bromodomain adjacent to zinc finger domain, 2B, mRNA (cDNA clone IMAGE:4604338), partial cds.
BC068527 - Homo sapiens cDNA clone IMAGE:30335098, partial cds.
BX647250 - Homo sapiens mRNA; cDNA DKFZp686C2388 (from clone DKFZp686C2388).
BC012576 - Homo sapiens bromodomain adjacent to zinc finger domain, 2B, mRNA (cDNA clone IMAGE:4290975), complete cds.
KJ902524 - Synthetic construct Homo sapiens clone ccsbBroadEn_11918 BAZ2B gene, encodes complete protein.
CU680370 - Synthetic construct Homo sapiens gateway clone IMAGE:100019975 5' read BAZ2B mRNA.
LF205705 - JP 2014500723-A/13208: Polycomb-Associated Non-Coding RNAs.
MA441282 - JP 2018138019-A/13208: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: AK307683, ENST00000482503.1, ENST00000482503.2, ENST00000482503.3, ENST00000482503.4, uc010fop.1, uc010fop.2
UCSC ID: ENST00000482503.5
RefSeq Accession: NM_001329858

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.