D. melanogaster Gene drongo (CG3365-RA) Description and Page Index
  Description: CG3365-PA, isoform A.
Transcript (Including UTRs)
   Position: dm3 chr2L:833,584-842,691 Size: 9,108 Total Exon Count: 5 Strand: -
Coding Region
   Position: dm3 chr2L:834,285-837,338 Size: 3,054 Coding Exon Count: 4 

Page IndexSequence and LinksMicroarray ExpressionProtein StructureOther SpeciesGO Annotations
FlyBase RolesSynonymsIn SitusmRNA DescriptionsOther NamesMethods
Data last updated: 2008-10-21

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2L:833,584-842,691)mRNAProtein (532 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaFlyBasePubMed
RefSeqUniProtKB

-  Microarray Expression Data
 
Expression ratio colors:

Arbeitman et al. 2002 Life-Cycle Expression Data

     
          
          
     
     
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-  Protein Domain and Structure Information
  ModBase Predicted Comparative 3D Structure on Q9VPU2
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanMouseRatZebrafishC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0005215 transporter activity

Biological Process:
GO:0006139 nucleobase-containing compound metabolic process
GO:0015931 nucleobase-containing compound transport
GO:0043087 regulation of GTPase activity
GO:0006810 transport


-  FlyBase Biological Roles [Jan. 2006 data]
 
  • drongo is also expressed during oogenesis. (Pritchard et al., 1997, A. Dros. Res. Conf. 38: 84B)

-  FlyBase Synonyms for Gene and Its Alleles [Jan. 2006 data]
  Symbol: drongo Name: n/a BDGP: CG3365-RA FlyBase: FBgn0020304
Synonyms: CG3365, drongo+, drongoBG01320, drongoDG30512, drongoc02371, drongoc05389

-  BDGP Expression In Situ Images
  In situ images for BDGP gene CG3365 (drongo, FlyBase gene FBgn0020304) are available from the BDGP Gene Expression project.
Number of images: 51
Number of body parts: 22
EST: GH16240
DGC Plate: UG.29
Plate position: 57

-  Descriptions from all associated GenBank mRNAs
  BT072822 - Drosophila melanogaster MIP02612 full insert cDNA.
AF097364 - Drosophila melanogaster Drongo (drongo) mRNA, complete cds.
AY119526 - Drosophila melanogaster GH16240 full insert cDNA.
FJ635889 - Synthetic construct Drosophila melanogaster clone BS07494 encodes drongo-RC.
FJ631010 - Synthetic construct Drosophila melanogaster clone BO07994 encodes drongo-RC.
BT099783 - Drosophila melanogaster AT07355 full insert cDNA.
BT099777 - Drosophila melanogaster AT25538 full insert cDNA.
JV219291 - TSA: Drosophila melanogaster isotig01648.Dmte mRNA sequence.
JV219292 - TSA: Drosophila melanogaster isotig01649.Dmte mRNA sequence.

-  Other Names for This Gene
  UCSC ID: CG3365-RA
RefSeq Accession: NM_164392
Protein: Q9VPU2

-  FlyBase Genes Methods, Credits, and Data Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.