Mouse Gene Mbnl2 (ENSMUST00000167459.2) Description and Page Index
  Description: Mus musculus muscleblind like splicing factor 2 (Mbnl2), transcript variant 4, mRNA. (from RefSeq NM_001360377)
Gencode Transcript: ENSMUST00000167459.2
Gencode Gene: ENSMUSG00000022139.17
Transcript (Including UTRs)
   Position: mm10 chr14:120,275,721-120,431,695 Size: 155,975 Total Exon Count: 10 Strand: +
Coding Region
   Position: mm10 chr14:120,325,239-120,428,949 Size: 103,711 Coding Exon Count: 9 

Page IndexSequence and LinksCTDRNA StructureOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2019-09-19

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:120,275,721-120,431,695)mRNA (may differ from genome)Protein (385 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerGeneCardsPubMed
Stanford SOURCEUniProtKBWikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -173.70630-0.276 Picture PostScript Text
3' UTR -597.702746-0.218 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
GenBankRGD  WormBase 
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  AK220470 - Mus musculus mRNA for mKIAA4072 protein.
AK151913 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830042L08 product:muscleblind-like 2, full insert sequence.
AK151926 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830043F20 product:muscleblind-like 2, full insert sequence.
AK151957 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830043N18 product:muscleblind-like 2, full insert sequence.
AK164372 - Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130076O03 product:muscleblind-like 2, full insert sequence.
AK028797 - Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732457D15 product:ZINC FINGER PROTEIN homolog [Homo sapiens], full insert sequence.
AK085709 - Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730020H24 product:ZINC FINGER PROTEIN homolog [Homo sapiens], full insert sequence.
AK159213 - Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420010C06 product:muscleblind-like 2, full insert sequence.
BC079898 - Mus musculus muscleblind-like 2, mRNA (cDNA clone IMAGE:30621554).
BC023895 - Mus musculus muscleblind-like 2, mRNA (cDNA clone IMAGE:5321034), with apparent retained intron.
AK148740 - Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120441J03 product:unclassifiable, full insert sequence.
AK178232 - Mus musculus cDNA, clone:Y0G0105O16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK210843 - Mus musculus cDNA, clone:Y2G0119M22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK178090 - Mus musculus cDNA, clone:Y0G0105G09, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK167479 - Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530016L06 product:muscleblind-like 2, full insert sequence.
AK153261 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830130A11 product:muscleblind-like 2, full insert sequence.
AK167694 - Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530028M09 product:muscleblind-like 2, full insert sequence.
BC075665 - Mus musculus muscleblind-like 2, mRNA (cDNA clone MGC:99980 IMAGE:30605146), complete cds.
BC020406 - Mus musculus muscleblind-like 2, mRNA (cDNA clone IMAGE:3663266).
AK195501 - Mus musculus cDNA, clone:Y1G0118L02, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000040689, based on BLAT search.
BC026711 - Mus musculus muscleblind-like 2, mRNA (cDNA clone IMAGE:5358037).
GQ906534 - Mus musculus muscleblind-like 2 isoform 3 (Mbnl2) mRNA, complete cds, alternatively spliced.
AK206292 - Mus musculus cDNA, clone:Y2G0104F23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK216404 - Mus musculus cDNA, clone:Y2G0138E05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK177332 - Mus musculus cDNA, clone:Y0G0102G13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK192385 - Mus musculus cDNA, clone:Y1G0108L18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK217689 - Mus musculus cDNA, clone:Y2G0142K02, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000022738, based on BLAT search.
AK040488 - Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430103A02 product:unclassifiable, full insert sequence.
AK003316 - Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110002M11 product:unclassifiable, full insert sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A2K6EDM5, NM_001360377, uc007uzt.1, uc007uzt.2
UCSC ID: uc007uzt.2
RefSeq Accession: NM_001360377
CCDS: CCDS49567.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.