Mouse Gene Bcl7c (ENSMUST00000205977.2) from GENCODE VM30
  Description: Mus musculus B cell CLL/lymphoma 7C (Bcl7c), transcript variant 1, mRNA. (from RefSeq NM_001347652)
Gencode Transcript: ENSMUST00000205977.2
Gencode Gene: ENSMUSG00000030814.18
Transcript (Including UTRs)
   Position: mm39 chr7:127,265,968-127,307,811 Size: 41,844 Total Exon Count: 6 Strand: -
Coding Region
   Position: mm39 chr7:127,266,021-127,307,699 Size: 41,679 Coding Exon Count: 6 

Page IndexSequence and LinksCTDRNA StructureOther SpeciesmRNA Descriptions
Other NamesMethods
Data last updated at UCSC: 2022-06-02 09:33:23

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:127,265,968-127,307,811)mRNA (may differ from genome)Protein (241 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
EnsemblEntrez GeneExonPrimerGeneCardsPubMedStanford SOURCE
UniProtKB

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -54.50112-0.487 Picture PostScript Text
3' UTR -16.7053-0.315 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
 RGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  AK049064 - Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230096E12 product:B-cell CLL/lymphoma 7C, full insert sequence.
BC002252 - Mus musculus B-cell CLL/lymphoma 7C, mRNA (cDNA clone IMAGE:3493496), partial cds.
BC058530 - Mus musculus B-cell CLL/lymphoma 7C, mRNA (cDNA clone MGC:67056 IMAGE:6818556), complete cds.
BC005673 - Mus musculus B-cell CLL/lymphoma 7C, mRNA (cDNA clone MGC:11464 IMAGE:3153237), complete cds.
Y11905 - M.musculus BCL7C mRNA.
AK131935 - Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410004K23 product:B-cell CLL/lymphoma 7C, full insert sequence.
LF240205 - JP 2014500723-A/47708: Polycomb-Associated Non-Coding RNAs.
MA475782 - JP 2018138019-A/47708: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A0U1RNX8, ENSMUST00000205977.1, NM_001347652, uc057lve.1, uc057lve.2, uc057lve.3
UCSC ID: ENSMUST00000205977.2
RefSeq Accession: NM_001347652

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.