Mouse Gene Cracd (ENSMUST00000238963.2) from GENCODE VM30
  Description: Cracd (from geneSymbol)
Gencode Transcript: ENSMUST00000238963.2
Gencode Gene: ENSMUSG00000036377.20
Transcript (Including UTRs)
   Position: mm39 chr5:76,806,177-77,021,177 Size: 215,001 Total Exon Count: 12 Strand: +
Coding Region
   Position: mm39 chr5:76,918,097-77,018,524 Size: 100,428 Coding Exon Count: 10 

Page IndexSequence and LinksRNA StructureOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated at UCSC: 2022-06-02 09:33:23

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr5:76,806,177-77,021,177)mRNA (may differ from genome)Protein (1376 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaAlphaFoldBioGPS
EnsemblExonPrimerGeneCardsPubMedUniProtKB

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -102.10312-0.327 Picture PostScript Text
3' UTR -716.902653-0.270 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserGenome BrowserNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
GenBankRGDEnsembl   
Protein SequenceProtein SequenceProtein Sequence   
AlignmentAlignmentAlignment   

-  Descriptions from all associated GenBank mRNAs
  AK013453 - Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810489J07 product:hypothetical protein, full insert sequence.
AK143708 - Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430011I10 product:hypothetical protein, full insert sequence.
AK016430 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931405B09 product:hypothetical protein, full insert sequence.
AK030106 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932442C03 product:similar to KIAA1211 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence.
AK015929 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930529A19 product:hypothetical protein, full insert sequence.
BC053480 - Mus musculus RIKEN cDNA C530008M17 gene, mRNA (cDNA clone IMAGE:6432806).
BC086807 - Mus musculus RIKEN cDNA C530008M17 gene, mRNA (cDNA clone IMAGE:30632196), partial cds.
AK122469 - Mus musculus mRNA for mKIAA1211 protein.
AK049629 - Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530008M17 product:hypothetical protein, full insert sequence.
AK029850 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931412G10 product:similar to KIAA1211 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence.
AK042228 - Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630073A14 product:similar to KIAA1211 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence.
AK050000 - Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630045F06 product:similar to HYPOTHETICAL 67.3 KDA PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence.
AK164672 - Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530035A11 product:hypothetical protein, full insert sequence.
DQ687579 - Mus musculus piRNA piR-102901, complete sequence.
DQ719748 - Mus musculus piRNA piR-135070, complete sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A5F8MPP1, ENSMUST00000238963.1, uc294jop.1, uc294jop.2
UCSC ID: ENSMUST00000238963.2
RefSeq Accession: NM_001163793

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.